NONHSAT080758
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT080758 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
952 nt |
Genomic location |
chr20-:61144250..61148750 |
Exon number |
3 |
Exons |
61144250..61144909,61145034..61145207,61148633..61148750 |
Genome context |
|
Sequence |
000001 ACGTGGCTGG GAGAGCTGCA GAAGTGCCGA GTCCCGGCCG GGGGCAGCCT CGCCGCCGCT CAGCTCGGGA ATCCCTGCCC 000080
000081 CCCACCAGCA CCTCAGTGGG GGATACTGCA AGTTCAAGGT GGTTTAAGGC GTGAATGAAT GAAGGAGCAA GCAGTAAGCC 000160 000161 CCGACAGCAA GGCCACCACA GCCCTCGCCC CACAGGGACG CCTGAGCAAG GACCCAAGCA GGGGACAAGC AGGCTCACCC 000240 000241 CGCCCTTGCG GGGCTGACCA CGAGGCCCCG TCCGGTGGAA CACGCCATGA CGcttcaGGA GGCTCATGTA GCTGGCGCCG 000320 000321 TATGGGACAG CGGGGGAGAG AGAAAATGCA CAGCCCAGGG AATGTGGAGA CAGGCCCAGC GCCAGGCATG GGGGCCGGAA 000400 000401 GGAGCAGCCG GGGAGCAGGG GGCAGGGCCT GGAGTCCCGC CTTGCAGGTC AGAGGTCAGA ggtcagggaa ggcctgggtg 000480 000481 ggggtgaatg aacaggcccc ccagtgatgt cagaggggca ggcggggaag ggtcccggaa gagcaccccg gggagtgtgt 000560 000561 acaggaaggc aggagcccgg aggcgggaag gggggcctgg tgtgtccagc gggcagcagg aggccagcat ggctgccact 000640 000641 ggggcagtgg cagtggatgg gtggcctggg gctgggcttc gggcagggtc agaccacgtc aggccttgta ggccagtgcc 000720 000721 agggctgcag gtgtcctgct gaggggcaca ggCCTGGGCA GGCTGGCACG GCTATAGCAG GGTCCTTATG GCTTATCTGC 000800 000801 TGAGGGTGAG GGTGGAGGGC AGAGGCTGGA GCATCAGGGG CCCTGCCCAG CTGCGGTGCC Ctggggaggg ctgcccagct 000880 000881 ctggctgtgc cttgaaagtt tgcccgaaag attcactgtt ggagcagatg tggtcacaag agcaaggggg ga |
Predicted Small Protein
Name | NONHSAT080758_smProtein_506:802 |
Length | 99 |
Molecular weight | 9829.1391 |
Aromaticity | 0.0510204081633 |
Instability index | 54.2163265306 |
Isoelectric point | 9.48321533203 |
Runs | 15 |
Runs residual | 0.0140186915888 |
Runs probability | 0.0426426426427 |
Amino acid sequence | MSEGQAGKGPGRAPRGVCTGRQEPGGGKGGLVCPAGSRRPAWLPLGQWQWMGGLGLGFGQ GQTTSGLVGQCQGCRCPAEGHRPGQAGTAIAGSLWLIC |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEELLLLLLLLLLLLLHHHHHLLLLLLLLL LLEEELEEELLLLLELLLLLLLLLLHHHHLLLEEEEEL |
PRMN | - |
PiMo | - |