NONHSAT080795
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT080795 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
838 nt |
Genomic location |
chr20+:61448795..61458172 |
Exon number |
14 |
Exons |
61448795..61448987,61449870..61449905,61450574..61450645,61451281..61451334,61452533..61452568,61452859..61452882,61453109..61453162,61453463..61453516,61453943..61453984,61455797..61455853,61456320..61456373,61457169..61457222,61457556..61457609,61458119..61458172 |
Genome context |
|
Sequence |
000001 GGGTCTCACC GAGGAGAGCG GCGGTCGTCG CAGGCCCCGG AGCCGCTCGG GACCCGGGAG GAGGGGACGC CGGGTCAGGC 000080
000081 CCACGGGGGC ACCTGCGCTC CTTAATGAGT TTTCTCCGTT TCAGAGAGTG GGACTccccg gcccccccgg ccccccaggg 000160 000161 ccgcccgggA AGCCCGGCCA GGACGGCATT GACGGAGAAG CTGGTCCTCC AGGTCTGCCT GGGCCCCCGG GACCAAAGGG 000240 000241 GGCCCCAGGA AAGCCGGGGA AACCAGGAGA GGCTGGGCTG CCGGGACTGC CGGGTGTGGA TGGTCTGACT GGACGAGATG 000320 000321 GACCCCCTGG ACCCAAGGGT GCCCCTGGGG AACGGGGAAG TCTGGGACCC CCGGGGCCGC CCGGGCTGGG GGGCAAAGGC 000400 000401 CTCCCTGGAC CCCCCGGAGA GGCAGGAGTG AGCGGCCCCC CAGGTGGGAT CGGCCTCCGC GGCCCCCCGG GACCTTCTGG 000480 000481 ACTCCCCGGC CTCCCTGGTC CCCCAGGACC TCCCGGACCC CCTGGACACC CAGGAGTCCT CCCTGAAGGC GCTACTGACC 000560 000561 TTCAGTGCCC AAGTATCTGC CCGCCAGGTC CCCCAGGGCC CCCTGGAATG CCAGGGTTCA AGGGACCCAC TGGCTACAAA 000640 000641 GGCGAGCAGG GGGAAGTCGG CAAGGACGGC GAGAAGGGTG ACCCTGGCCC CCCTGGGCCC GCCGGCCTCC CGGGCAGCGT 000720 000721 GGGGCTGCAG GGCCCCCGGG GATTACGAGG ACTGCCAGGG CCACTCGGGC CCCCTGGGGA CCGGGGTCCC ATTGGGTTCC 000800 000801 GAGGGCCGCC TGGGATCCCA GGAGCGCCTG GGAAAGCG |
Predicted Small Protein
Name | NONHSAT080795_smProtein_104:307 |
Length | 68 |
Molecular weight | 7592.6271 |
Aromaticity | 0.0597014925373 |
Instability index | 76.1059701493 |
Isoelectric point | 9.77532958984 |
Runs | 11 |
Runs residual | 0.0208642650621 |
Runs probability | 0.0449647508471 |
Amino acid sequence | MSFLRFREWDSPAPPAPQGRPGSPARTALTEKLVLQVCLGPRDQRGPQESRGNQERLGCR DCRVWMV |
Secondary structure | LLLEEEEELLLLLLLLLLLLLLLHHHHHHHHLEEEEEEELLLLLLLLLLLLLLLEELLLL EEEEEEL |
PRMN | - |
PiMo | - |