NONHSAT080916

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT080916

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1250 nt

Genomic location

chr20-:62330809..62332129

Exon number

2

Exons

62330809..62331882,62331954..62332129

Genome context

Sequence
000001 TTCTGAGAGT CCCGGGCCCA CAGGCAGGAC AGGGCCAGAC GTGGGGGCTG CTCCTCACGG CCTTACCTCC CCCAGACGTG 000080
000081 CCTCTCAATC CCTGACATCA AGACGGCCTT CAGCGACTGC ACCAGCAAGA TCGGCAGGCG AGATTGCCTG ACCCAGGCCT 000160
000161 GCTCGGCCCT CACAGGCAAA GGGGTGCGCG AGGGCATCGA GTGGATGGTG AAGTGTGTCG TGCGGAATGT GCACCGGCCG 000240
000241 CCGCGGCAGA GGGACATCAC GTAGGCGCAG CCGCGCTGCC GTCGGGACGG CTGGTCCCCT GGTGCTGGAG GAGTGGCCTC 000320
000321 CTGTTGGCTC CCATGCTGCT GATCTGGGGG GTGGGTTTGC TTTGCTTTGG GGTTCTTCTA TTTACTTTGT TTTCTCGAAG 000400
000401 ACAAACTTTC CTCTATGTCT GGAAAAGCGT AGGCATCCGG AGGCTTTGGA GGGGAGTCTG GCAGCCCGGC TGGCCCAGGC 000480
000481 CCTGCAGCGG CAGCCTTTCC ACAGGGCGCA GCGGCGGCCT TTCGAGGCCC TTTCTGGGGG GTCTGAGGGA GACCTGGTTG 000560
000561 GGAATTGGGG CTCCAGTGCT CAGGCTGGCT TGGGCTGCAT GAGGACAGCC CTGTGGGACC CTCGGGAGAC CCCGTGGCTG 000640
000641 TCTCCGCCCC ATCGAGGAGG AGGCCCGTCA GCCATGGCTG CCATCTGGCT TCTGCCCTgt gaccccgtga ccccgtgacc 000720
000721 ccgAAGTGGT CTGGGGCTGA TCTTGCCTTG AGGAAGACCC AGGCCATGTT CCCAAAGGCC AGCGGGGGCC CTGGATTGTG 000800
000801 ATGCAGCCTC GGGACAGGGC TGAGGCCTGC GGGGGAAGAC CTATACCCCA CGCCTGGGCC TGGCTTCACC TCACCCTAAT 000880
000881 CCCCCGGGAG GGAGCTGACT GATGCAAAAA GCTGAGGGGG CCTGCTGGGA GTGGCTGTTT TTATGCCCCA GCCCCGCAAG 000960
000961 TTGGGGAGTG TTTGTGGGGG TCCAGAGCCC TCCCCCAGCC AGGAGAGAAC CTCCCGGAGG GGTTCTCTGT GGGGCCCTGT 001040
001041 GTCCCCTGCT CGGGAGTAAG GCTGGTCCTG GGGTCCTCCC TGCACGGACC CCACTGGGCC TGCCGAGTGC TGTGTTCTTC 001120
001121 CTCAGTCTGG CTGTGGGCAG GAGCGGCCTG CCCAGTGTCA CCCAGGGTGA GTGCAAAATA AAGACGGCGA GTGTGGCTCT 001200
001201 GTCCATCCCT TCCCTCCTGG AGGGTGGAGG CTCCTGGCTG TTGGACACGG
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Predicted Small Protein

Name NONHSAT080916_smProtein_332:601
Length 90
Molecular weight 9960.7532
Aromaticity 0.14606741573
Instability index 48.1797752809
Isoelectric point 12.0037231445
Runs 17
Runs residual 0.0478078871998
Runs probability 0.0372050250942
Amino acid sequence MLLIWGVGLLCFGVLLFTLFSRRQTFLYVWKSVGIRRLWRGVWQPGWPRPCSGSLSTGRS
GGLSRPFLGGLRETWLGIGAPVLRLAWAA
Secondary structure LEEEELLLEEELEEEEEEEEELLEEEEEEEEELLEEEEEELEELLLLLLLLLLLLLLLLL
LLLLLLLLLLHHHHHHLLLHHHHHHHHHL
PRMN LLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLLLLLLLLLLLLL
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