NONHSAT080941
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT080941 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1073 nt |
Genomic location |
chr20+:62439442..62454358 |
Exon number |
3 |
Exons |
62439442..62439508,62452103..62452224,62453475..62454358 |
Genome context |
|
Sequence |
000001 GACCGACGGA GGTGGCGTGG ATGAGCAGCA GCCGCCTGAG CAGTGAGGAA ACCCCGCGGA CAGCGCGATG GAGCCTCACA 000080
000081 CTGTTGCCCA GGCTGGAGTG CCACAGCACG ATCTCGGCTC ACTGCAATCT CTGCTTCCCA GGTTCAAGCG ATTCTCCTGC 000160 000161 CTCATCCTCC CGAAGATCTG GGACTACAGA AACATGAACA CAGCCCTGAT CAAGCGGAAC CGATACACTC CCGAAACAGG 000240 000241 CAGAAAATCC TAAACACACT TGCAGCACCA GCCAGCAAAG CTGCACTCAC AGCGTCGGGA ACCGGAGGTG GCTGGGAGAA 000320 000321 CCGGGAATAA ACGACGGGAC ACACGTCCAG CCTTCCTGAG TTCAAGCGCC CTGAATTCAC CCACCAGCAC ACCCATGGGG 000400 000401 GAGACGGGCA CTTTTGTATG TGACACGGGC CCCCAATGAG AAAAGCCTGG GGTGCTCTCC CTAGAGCTGA CACGTGTACA 000480 000481 CGCATGCAAA ACCCAGCCCT GGGACTGATG GGCTCTAGGC CCCGACAAAG GAGCACAGGA GGCCTATTCC ATTTCAGTAC 000560 000561 AATGGGTTCC GTGATTGGCC AAGGCTGGGC TCAGTCCTAC ACCAGACTGA CAGCTTCCTC ACCCTCCCAC GCTTGGGTTT 000640 000641 AAAGACATGT CCACAGGAAG ATGCACCATC AGTCAACGGC TGCTGTTAGG AGAAACAGGA ACAGCACTGA CCACACGGCG 000720 000721 AGCACAGGAC ACGGCCAACC CGGCAAGCAC GAAAACATGA GAGTGAAGCC TACAGTGAGT CTCGGAATTC CAGACCACGG 000800 000801 GCCAGGTGCT ATGGCTCACA CCTGTCGTCC CAGCACTTTG GGAGGCTGAG GCAGGATGAA TGCTTGAGCC CAGGAGTTTG 000880 000881 AGACCAGCCT GGGCAACACA GCGAGACCCT GTCTGTACAA AACATGTTTT AAAAATGGAA ACAAAAAGTC GGGAGCGGTG 000960 000961 GCACACACCT GTCATCCTAG CACTTTGGGA AGCCGAGACG GGTGGATCAC TTAAGCTCAG GAGTTCGAGA CCAGCCTGGG 001040 001041 CAACATGGAC AAACCCCGTC TGTACTAAAA CTT |
Predicted Small Protein
Name | NONHSAT080941_smProtein_20:196 |
Length | 59 |
Molecular weight | 6270.8496 |
Aromaticity | 0.0344827586207 |
Instability index | 112.086206897 |
Isoelectric point | 7.78656005859 |
Runs | 8 |
Runs residual | 0.0186623721106 |
Runs probability | 0.0302618795266 |
Amino acid sequence | MSSSRLSSEETPRTARWSLTLLPRLECHSTISAHCNLCFPGSSDSPASSSRRSGTTET |
Secondary structure | LLLLLLLLLLLLLHHHHEELLLLLEEEELLEEEELLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |