NONHSAT081141
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT081141 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1275 nt |
Genomic location |
chr21+:15379455..15387201 |
Exon number |
11 |
Exons |
15379455..15379519,15380508..15380623,15381910..15381994,15382564..15382638,15383098..15383195,15383683..15383740,15384017..15384131,15384441..15384603,15385824..15385978,15386082..15386169,15386945..15387201 |
Genome context |
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Sequence |
000001 TTGTTTCAGA AGTGCTGCCT GGGGCAGAGG ATCCTGGAGG CCTGGGAAGC CAATGACCAC ACACAGGCGA CGGGTGGCAT 000080
000081 GAGGCATGGG AACATAGGCC ACCTCACGCA GATCGCCAAC GTGCTGGTGC AGAACCTGGA GCAGGGCTCT GTGCAGACGC 000160 000161 ACATCAGCGA GGTCATCTGA GAGCTCCCTG TGGATTGCCA TGGCTGCTAG GAGAGCTTCG TGGAGGAGAC GCTGACGGAG 000240 000241 ACCAACTGCA GGAACACTGT GGACTTGCAA GCACTCACTA CCTTCACTCC TGGAGTGAGG ACATTGAGGG TGCTTTCCCT 000320 000321 AATGAGCTGT CCCTTCAGCA GGCCTTCTCT GACTACCAGA TCCAGCAGAT GACGGCCAAC TTTGTGGATC AGTTTGGCTT 000400 000401 CAATGATGAG GAGTTTGCAG ACCATGACAA CAACATCAAC GCCCCATTTG ACAGGATCGC GGAGATCAAC TTCAACATCG 000480 000481 ACACTGACGA GGACAGTCCC AGCGCGGCTC TGAGGCCTGC TGCAGCGACC GCATCCAGCA CTTTGATGAG AACGAGGACA 000560 000561 TCTCGGAGGA CAGCGACACT TGCTGTGCTG CCCAGGTGAA GGCCAGAGCC AGGTTTGGAG CCCCCCATGC TTCAGAAAGC 000640 000641 TGCTCAAAGA ATGGCCCGGA GTGCGGAGGC CAGGATGGGA AGGCGAGCTT GGAAGCAGAC CATGATGCGC CTGGGGCAGG 000720 000721 TGCCCCCTAG ACCCTGGAAA GAACAAAGCC CCTCCTCTGG AGGGTGACTC AGAAGACACC ATATGGATGA CAGTGTTTGA 000800 000801 TAAGCCAGCA AACTCGACGC CCATAGCCCC AGGAGTGGTG AGGGACAGGG TTCCAGCGTG TGGGCAGCTG GCACCTCAGC 000880 000881 TCCAGAGGAG AAAGGCTGGG CCAGTTCACC GAATTCCAGC CTTTCTGCTG CTCCGAGTCA GGGCCCAGGT GCAGCTCTCT 000960 000961 GATGGACACA AAACACAGCC AGGCTGAGGC AGCCAGAGCC AAGGCCTCGA GAAAGCCTTC AGCCCAGCTT CTCCATGTAC 001040 001041 CTCCGTGTAC CTCCGTGTGT GTCACCAGGA AGGCCCCCCT GCTGGCCTCT GACAGCAGCT CCTGTGGGGG CTCCGACAGC 001120 001121 GATACATGAC GACCAGAAGG CAGTGAGTGC CATGGATGCT GTGAACACCC GTCCGGGCTA GGAGGCCCCC CGCCCCCGCT 001200 001201 GCCCACAGTG GCCAGGACAG AGGAGGCTGT CAGCAGGTGT GTGGGGCGTC GGGGGTAGGT GGGCAGGCCT GCCTG |
Predicted Small Protein
Name | NONHSAT081141_smProtein_368:598 |
Length | 77 |
Molecular weight | 8404.0793 |
Aromaticity | 0.0789473684211 |
Instability index | 57.6986842105 |
Isoelectric point | 4.50750732422 |
Runs | 14 |
Runs residual | 0.0428009679371 |
Runs probability | 0.0467484291014 |
Amino acid sequence | MTANFVDQFGFNDEEFADHDNNINAPFDRIAEINFNIDTDEDSPSAALRPAAATASSTLM RTRTSRRTATLAVLPR |
Secondary structure | LLLLEELLLLLLLHHHLLLLLLLLLLHHHHEEEEELLLLLLLLLLLLLLHHHHHLLLLEE ELLLLLLEEEEEELLL |
PRMN | - |
PiMo | - |