NONHSAT081141

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT081141

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1275 nt

Genomic location

chr21+:15379455..15387201

Exon number

11

Exons

15379455..15379519,15380508..15380623,15381910..15381994,15382564..15382638,15383098..15383195,15383683..15383740,15384017..15384131,15384441..15384603,15385824..15385978,15386082..15386169,15386945..15387201

Genome context

Sequence
000001 TTGTTTCAGA AGTGCTGCCT GGGGCAGAGG ATCCTGGAGG CCTGGGAAGC CAATGACCAC ACACAGGCGA CGGGTGGCAT 000080
000081 GAGGCATGGG AACATAGGCC ACCTCACGCA GATCGCCAAC GTGCTGGTGC AGAACCTGGA GCAGGGCTCT GTGCAGACGC 000160
000161 ACATCAGCGA GGTCATCTGA GAGCTCCCTG TGGATTGCCA TGGCTGCTAG GAGAGCTTCG TGGAGGAGAC GCTGACGGAG 000240
000241 ACCAACTGCA GGAACACTGT GGACTTGCAA GCACTCACTA CCTTCACTCC TGGAGTGAGG ACATTGAGGG TGCTTTCCCT 000320
000321 AATGAGCTGT CCCTTCAGCA GGCCTTCTCT GACTACCAGA TCCAGCAGAT GACGGCCAAC TTTGTGGATC AGTTTGGCTT 000400
000401 CAATGATGAG GAGTTTGCAG ACCATGACAA CAACATCAAC GCCCCATTTG ACAGGATCGC GGAGATCAAC TTCAACATCG 000480
000481 ACACTGACGA GGACAGTCCC AGCGCGGCTC TGAGGCCTGC TGCAGCGACC GCATCCAGCA CTTTGATGAG AACGAGGACA 000560
000561 TCTCGGAGGA CAGCGACACT TGCTGTGCTG CCCAGGTGAA GGCCAGAGCC AGGTTTGGAG CCCCCCATGC TTCAGAAAGC 000640
000641 TGCTCAAAGA ATGGCCCGGA GTGCGGAGGC CAGGATGGGA AGGCGAGCTT GGAAGCAGAC CATGATGCGC CTGGGGCAGG 000720
000721 TGCCCCCTAG ACCCTGGAAA GAACAAAGCC CCTCCTCTGG AGGGTGACTC AGAAGACACC ATATGGATGA CAGTGTTTGA 000800
000801 TAAGCCAGCA AACTCGACGC CCATAGCCCC AGGAGTGGTG AGGGACAGGG TTCCAGCGTG TGGGCAGCTG GCACCTCAGC 000880
000881 TCCAGAGGAG AAAGGCTGGG CCAGTTCACC GAATTCCAGC CTTTCTGCTG CTCCGAGTCA GGGCCCAGGT GCAGCTCTCT 000960
000961 GATGGACACA AAACACAGCC AGGCTGAGGC AGCCAGAGCC AAGGCCTCGA GAAAGCCTTC AGCCCAGCTT CTCCATGTAC 001040
001041 CTCCGTGTAC CTCCGTGTGT GTCACCAGGA AGGCCCCCCT GCTGGCCTCT GACAGCAGCT CCTGTGGGGG CTCCGACAGC 001120
001121 GATACATGAC GACCAGAAGG CAGTGAGTGC CATGGATGCT GTGAACACCC GTCCGGGCTA GGAGGCCCCC CGCCCCCGCT 001200
001201 GCCCACAGTG GCCAGGACAG AGGAGGCTGT CAGCAGGTGT GTGGGGCGTC GGGGGTAGGT GGGCAGGCCT GCCTG
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Predicted Small Protein

Name NONHSAT081141_smProtein_368:598
Length 77
Molecular weight 8404.0793
Aromaticity 0.0789473684211
Instability index 57.6986842105
Isoelectric point 4.50750732422
Runs 14
Runs residual 0.0428009679371
Runs probability 0.0467484291014
Amino acid sequence MTANFVDQFGFNDEEFADHDNNINAPFDRIAEINFNIDTDEDSPSAALRPAAATASSTLM
RTRTSRRTATLAVLPR
Secondary structure LLLLEELLLLLLLHHHLLLLLLLLLLHHHHEEEEELLLLLLLLLLLLLLHHHHHLLLLEE
ELLLLLLEEEEEELLL
PRMN -
PiMo -