NONHSAT081152
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT081152 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
668 nt |
Genomic location |
chr21+:15596696..15599705 |
Exon number |
2 |
Exons |
15596696..15596858,15599201..15599705 |
Genome context |
|
Sequence |
000001 AGAAAATGAC ATTTGTAATA GGAATTTTAA GATTTTATTA CTTCTTCTTT CATCTCCTCA AAGGAATGAA GAAATGTTGG 000080
000081 TGGGCAGATC TTCCTTTCCC ATGCAGTATT TTCCAATTAA TAATACTTCT TTACCTCAAG AATATTTTCT CTTTCAGAAG 000160 000161 ATGCAGTGGC ATGTGTATAA TCCAGTGCTG CAGCTTCCTT ACTATGAAAT GACAGCTCCA CTTCCTAATA GTGCATCCGT 000240 000241 GTCTTCCTCA CTGAATCATG TTCCAGATCT TGAGGCTGGA CCCAGCTCAT ATAAATGGAC TCACCAACAA CCAAGTGACT 000320 000321 CTGACCTTTA TCAGATGACA GCTCCACTTC CTAATAGTGC ATCCGTGTCT TCCTCACTGA ATCATGTTCC AGATCTTGAG 000400 000401 GCTGGACCCA GCTCATATAA ATGGACTCAC CAACAACCAA GTGACTCTGA CCTTTATCAG ATGAATAAAC GAAAGAGACA 000480 000481 AAAGCAAACA AGTGATAGTG ATAGTAGCAC AGACAACAAC AGAGGCAACG AATGTAGCCA AAAGTTCCGA AAGTCTAAGA 000560 000561 AGAAGAAAAG ATACTAGTAT TACCTACAAA TGAAACTTAC CTACACTGAT CTTAGTTCTC TTATGAAAAA AATAAGATGT 000640 000641 TATCCCATCA AATAAACAAT GTCATGGC |
Predicted Small Protein
Name | NONHSAT081152_smProtein_5:211 |
Length | 69 |
Molecular weight | 8237.1298 |
Aromaticity | 0.220588235294 |
Instability index | 42.5442647059 |
Isoelectric point | 9.41705322266 |
Runs | 13 |
Runs residual | 0.0506756756757 |
Runs probability | 0.0373948609243 |
Amino acid sequence | MTFVIGILRFYYFFFHLLKGMKKCWWADLPFPCSIFQLIILLYLKNIFSFRRCSGMCIIQ CCSFLTMK |
Secondary structure | LEEEEHHHHHHHHHHHHHHHLHHHHHLLLLLLLHHHHHHHHHHHHHHHHHEELLLLEEEE EHHHEELL |
PRMN | HHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLL LLLLLLLL |
PiMo | TTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooo oooooooo |