NONHSAT081275

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT081275

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

484 nt

Genomic location

chr21+:18811211..18821300

Exon number

4

Exons

18811211..18811315,18813992..18814120,18816387..18816518,18821183..18821300

Genome context

Sequence
000001 GTTGAGACTC CAGGGGTGTT CGGGGCTGGG AGCCTGCTGA GTGTTCCCTG TTCCCACCTC CAATCTGCTC CATCCTCCAG 000080
000081 CTGCATTTCA TTCCGGATCT ACCAGCAGGA TCCAACTTTA CTACTGTCAT GGAGGGAATT ACAGTAATTC TACCAACTTT 000160
000161 TGAGGCAACC TTCTTCTGAC ACTGTGTGAA ACAGACTGAA AAGACTCTAA AGATGGAGAG AGCTCAATGC TTGATCTTTT 000240
000241 TTATACAGAG TCTTATTCTG TCACCTAGGC TGGAGTACAG TGGTGCAATC ACAGCTCACT GCAGCCTCGA TCTCCTGGAC 000320
000321 TCAACTAATC CTCCTGCCTC AGCCTTCTGG GTAGTTGAGA CTACAGATAC AGAAGATGAG AGAGAGAAAA AGAGAGAAAT 000400
000401 TACAGAGTGA CGGAGAAGGC AGACATCATG CAACATGCTC AAGGGCTATT CATTTTAAGC TGAAACATAC ATGTGTAGAA 000480
000481 AGCA
[back to top]

Predicted Small Protein

Name NONHSAT081275_smProtein_212:409
Length 66
Molecular weight 7417.2777
Aromaticity 0.0769230769231
Instability index 43.7430769231
Isoelectric point 4.56109619141
Runs 11
Runs residual 0.0189423076923
Runs probability 0.0388784506432
Amino acid sequence MERAQCLIFFIQSLILSPRLEYSGAITAHCSLDLLDSTNPPASAFWVVETTDTEDEREKK
REITE
Secondary structure LLHHHHHHHHHHHHHLLLLEEELLLEEEEELLLLLLLLLLLLLLEEEEELLLLHHHHHHH
HHHLL
PRMN -
PiMo -