NONHSAT081348
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT081348 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
609 nt |
Genomic location |
chr21+:21860955..21909629 |
Exon number |
2 |
Exons |
21860955..21861155,21909222..21909629 |
Genome context |
|
Sequence |
000001 AAAATATCTG GGACACCAAA CACTGAATAT TTTTATTAAG ATGGTACATG GCCCATAGGC AACATGCCAA GAGAAGCCAA 000080
000081 CAATAAAATA ATCTTTTCCC AATTACAAGA TTGAATTGAC ATTACACTAC TTGGTTTAAT TGAAAGTCCA ATACAATGAG 000160 000161 GAGTGTTATC TTCTTGGATG TTATTATTGC AATAGATAAA CAAATTGTTA AGAACAAAGA AGTTTCATGC AGCGTGATTA 000240 000241 ATGAGCTTGG AATAATTAAC CTTGATATAA AGCAAAGTAT AATTGCAGAA ATTCACTTTA TATTAGCCAT ACAGTAGATA 000320 000321 TGAGCAAATT TTACAGAATT GTCATATACA TCAAATCCTA TGGTCTCAAT GCAATTAAAT TAGACTACAT TAACAACATG 000400 000401 TTAATAAATA AAATCTTCAC CCAACTGGAG ATTGAATGTT TTTAAAAACC TATTTTCCAA TAACTCATGT TATAAACAAT 000480 000481 GAAATGACTT GAGAACTCAT CTTAAAAAAA TTTCAGCATA CAAATGTTTG GATAAGAAGG AACAGTTAGA ACTCACAAGG 000560 000561 TTGTATATGG AAACAAGATG TAAAGAAAAC TCTGCTGCCA TGGAACCCA |
Predicted Small Protein
Name | NONHSAT081348_smProtein_155:316 |
Length | 54 |
Molecular weight | 5963.1016 |
Aromaticity | 0.0377358490566 |
Instability index | 45.1981132075 |
Isoelectric point | 5.56390380859 |
Runs | 8 |
Runs residual | 0.00931891394386 |
Runs probability | 0.0426823882706 |
Amino acid sequence | MRSVIFLDVIIAIDKQIVKNKEVSCSVINELGIINLDIKQSIIAEIHFILAIQ |
Secondary structure | LLEEEEHHHHHHHHHHHHHLLLEEEEEELLLLLLLLLHHHHHHHHHHHHHHLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTToo |