NONHSAT081374
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT081374 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
583 nt |
Genomic location |
chr21+:22611662..22664510 |
Exon number |
5 |
Exons |
22611662..22611731,22652898..22652972,22656514..22656720,22658589..22658732,22664424..22664510 |
Genome context |
|
Sequence |
000001 AAAGGGAAAA TATGTGGCGG ATGCAGGAGA CAGGATGCAA GCAGTCTGAT GCCCATCATC TATATATAGG CTCTTCTTCA 000080
000081 AGTGACAATT TCACTTAGCA AAGTAGAGCT TAGTGTTGGA GAATCTAAAT TCTTCACATG TACAGCGATT GGTGAACCTG 000160 000161 AAAGTATAGA TTGGTATAAT CCTCAAGGAG AGAAGATAAT TTCAACACAG AGGGTAGTAG TGCAAAAGGA AGGTGTTAGG 000240 000241 TCACGGTTAA CCATCTACAA TGCAAATATA GAAGATGCAG GGATATATCG TTGTCAAGCA ACAGATGCCA AAGGACAAAC 000320 000321 ACAAGAAGCT ACAGTAGTTT TGGAAATTTA CCAAAAACTC ACTTTCAGAG AAGTGGTATC TCCACAAGAA TTCAAACAAG 000400 000401 GAGAAGATGC AGAAGTGGTT TGCCGAGTTA GCAGTTCACC TGCACCTGCT GTCAGCTGGT TGTATCATAA TGAGGAAGTC 000480 000481 ACCACTATTT CCGACAATCG GTTCGCTATG TTAGCAAACA ATAACCTGCA GATTCTCAAC ATCAATAAAA GTGATGAAGG 000560 000561 TATATACAGA TGTGAAGGAA GAG |
Predicted Small Protein
Name | NONHSAT081374_smProtein_11:97 |
Length | 29 |
Molecular weight | 3217.4835 |
Aromaticity | 0.107142857143 |
Instability index | 47.1678571429 |
Isoelectric point | 5.95758056641 |
Runs | 5 |
Runs residual | 0.0246478873239 |
Runs probability | 0.0368839427663 |
Amino acid sequence | MWRMQETGCKQSDAHHLYIGSSSSDNFT |
Secondary structure | LLLHHHLLLLLLLLEEEEEELLLLLLLL |
PRMN | - |
PiMo | - |