NONHSAT081556
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT081556 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1122 nt |
Genomic location |
chr21+:28342637..28397770 |
Exon number |
2 |
Exons |
28342637..28342727,28396740..28397770 |
Genome context |
|
Sequence |
000001 TATTTCCAAT ATAGCTCCAC TCCATAATTT GTATACTCTT TTAAGTAGCA TTTTCTCAAA TTTCCATTTG CTAAAGTGTC 000080
000081 ATTTCCTACC CAAGTGCTGG AGCTCTCAGA GCCACATTTC ATGACCCTTG TTTGACAGGA ACTTTGCTAA CAGATGCAGG 000160 000161 GAGGGACAGC CTTTGGAATT CCTTGAGGTA ATGTTATGTT ATACCAAAAA TATCTACTAG GGTTTTACAG AAATGCCAAA 000240 000241 CATTTTCGTA GAGTCTTTGG AATTCCTGTA GAAGGGTTTT ACATAGGAGC CATCATTTTT AGTGTACAAA TTTTCTTGTG 000320 000321 ATTTCATCAT GGAACATTTT AGTCTTCCAA ATATATTTTT GAGAAACAAC TTTGAGAGAG AATTTTTTTT TCATAAGATA 000400 000401 AAGAGCCCTC ATTAAGAAGT GTGAAAATTT TCTTAATTTC AATAGAAGAA TAATATTCTA AAGTCTCAAT ATAGATATGT 000480 000481 GAGAATATAG AAAATACTTT TCATTTTGGG ACAGGTCATT TATAAAAGGT AATTTATTTG ACAATTTCAC CATTTTCAAT 000560 000561 GCCTAAAAAA GATAAGTTTG GCATGATGCA CCACTATCAT TTTGTTGCTT TAAAAAATAC ATTGCTAATT AGACCTTGGA 000640 000641 AACAACATTT TTAGAGTTTG TTTTGCAGAG AAACACAGAT ACTCCTTAAG GTGACATGAA CACTTGGTAG CAGAATAGAA 000720 000721 ATAATAGTAA TCAATATATT GTTGAGTCTG GACACTCCAT GACCCTTAAA CTACTAAAGG ACAGTGTTAA TGACATCATG 000800 000801 GTCAAAGATT CTCATCTACT GTAAACAGGC CAGTTAGCTC AGTAAAGCTC TACACCAGGG CAGATATGAT CTTTAAATGG 000880 000881 TGTGTGAAAG AAAACCTCAC AACTCAGAAT GAGTTATGAG AAAGTGTGTT CATCACATTC TAGTCAGGAA AAACAACTTT 000960 000961 TCACCCTAAG ATAAAAACAA AGCAAAATAA GACAAAGCAA ACTCTTGCGG GAAGTCAGGG ACCCCAAATG GAGGGACCAG 001040 001041 CTGAAGCCAT GGCAGAAGAA CGTGGATTGT GAAGATTTCA TGGACATTTA TTAGTTCCCC AAATTAATGC TTTTGTAATT 001120 001121 TC |
Predicted Small Protein
Name | NONHSAT081556_smProtein_908:973 |
Length | 22 |
Molecular weight | 2488.7938 |
Aromaticity | 0.0952380952381 |
Instability index | 79.9285714286 |
Isoelectric point | 7.95794677734 |
Runs | 5 |
Runs residual | 0.00816326530612 |
Runs probability | 0.0396043101926 |
Amino acid sequence | MSYEKVCSSHSSQEKQLFTLR |
Secondary structure | LLEEEELLLLLHHHHHHHHLL |
PRMN | - |
PiMo | - |