NONHSAT081602
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT081602 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
513 nt |
Genomic location |
chr21+:29911640..29912677 |
Exon number |
2 |
Exons |
29911640..29911850,29912375..29912677 |
Genome context |
|
Sequence |
000001 TAATAACATC TACCAAACAG TTTACATTGT GCTAAACAAC TTATGCACAT TATTTCTTTG ATTCTTTTTA ACACATGGTT 000080
000081 GTGGGCTGAA TGGTGTCTCC CAAGAAGTCA TATGCCGGGA TCCTGTCCCA TAGTGCCTCA CAACGTGACA TTGTTTGGAG 000160 000161 TTAGGGTTGT TGAAGATGTC ATTAGTCAAG ATGAGGTCAT ACTTGAGTGA GGAAGAAGAG AACTGTAGAC ATGCAGCAGC 000240 000241 CATCTTGTGG ATATGAGGGA AGAGCCAAAT AGACTACAAA TCGGTTAACA CAGAGAACTA AAATTGTGGA GCTACTGAAT 000320 000321 GAACCAGCTA TGGAATTGTC TGTGTGTGGG CATTCAGATG GACATACCGG ATAAAATTCT GGACTGGTAA GAGTGTGGGG 000400 000401 AAATTGCCAG TCTTAAGCAG TGCTGATGGA GGTGTGAATT GGTAAAACAA TTTGAAAAGT AAGTTGCTAG TTTTTATAAA 000480 000481 ATTTTTAAAA ATAAATGTAT TCTCTGACCC AGT |
Predicted Small Protein
Name | NONHSAT081602_smProtein_89:163 |
Length | 25 |
Molecular weight | 2648.0015 |
Aromaticity | 0.0833333333333 |
Instability index | 46.7333333333 |
Isoelectric point | 9.69720458984 |
Runs | 6 |
Runs residual | 0.014880952381 |
Runs probability | 0.049446505329 |
Amino acid sequence | MVSPKKSYAGILSHSASQRDIVWS |
Secondary structure | LLLLLHHHHHEELLLLLLLLEEEL |
PRMN | - |
PiMo | - |