NONHSAT081644

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT081644

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

6033 nt

Genomic location

chr21-:30756061..30882561

Exon number

20

Exons

30756061..30756086,30756095..30756792,30760843..30761303,30788743..30789247,30795887..30796316,30825520..30825702,30826451..30826559,30829227..30829516,30829854..30830089,30842343..30843010,30846170..30846342,30849528..30849990,30855580..30855788,30859814..30860025,30860032..30860044,30870866..30871430,30877182..30877711,30878969..30878983,30878992..30879058,30882376..30882561

Genome context

Sequence
000001 GTTCTCCCTT ATTTTCAAAT TAGCACAGCT TAGAGCCAGG ATGATGGAAG ATTCAGTGCT GAGAGAAAGA AGACCCATTT 000080
000081 CCCAAGAGTA GTATCTTCAA ATGCAGACAT TCACACAGTT GCTTTTTATC ATTATTTGGG TCAAAAGTGC ATGACATATG 000160
000161 GAAAAACAAC AGAGGACATA CTATCTTCTT TTAGCCTTTT TCCAACTCTG CCCCTTTGCC CAAGGGTCTG GCTCTTTCAT 000240
000241 TAATTCCTGC AGGAAGACTT CTATTTTTTT TGTTTGTTTT CTTTTTTTTC TTTTTGAGCT TATATTCTCC TGGGATTTCA 000320
000321 AAAATATAAC CTCAGGATAT CTCTTCTCCC TTACCTTCCA TACTTGTTAC TATGTTTATG TTGGTGGGGT GACTTACTTG 000400
000401 GTGCTGAAGT GTTGGGGTGA CAAGGGCAGG GGAAGTCTCT GTGTCCCTAG CGGTGAATCC ATCCAAGAGG CTTCAAGATG 000480
000481 GCTGTCACTC TTATCCACAG AGCTTCATTT AGGCTTGATG ACTCAGGCTC TCTGCTGGTT CCCTGCCATA CCTGAAGGCA 000560
000561 CAGAACTCAT TCCATTGCTT GCTGTGGTTG GCTGGTAACT AGCAATTTCT GTTATCTATC TGTGGGCTAC TTGTCTGGCC 000640
000641 TTACATTACA GCCATTCTCT CTCTGGGAGC TTCTGCCTCA TCAGGGCACC CTTCTCTCTC TGGCCCCACA AATCAATGTA 000720
000721 GTGTTTTGCA TTTTTCCTAC TGTGGACTAT GCCCCAAAAC CATTGTTCTA ATCACTACAA TCATTACTAA CCATCTGGTT 000800
000801 TTTTTATCTC TTCCTCCAAT CAATCCCTCA AATTCCACCA CCATCCACAT TCTCCCGGGC TCCTGACAAT TATGTTTAGC 000880
000881 CCAACTCTAA CCACAGGCTT CAGAGGCTGT TTCCTCCTGA TTTTCCAAAT GAGGCAAAAT TGGAACCTCA TTTTTGTGAG 000960
000961 CTTCAAGCTC ACAACCAGCA GCAACTCAGC GCATGCTTCT GCACACATGA TGTGGACGTG CTTTTAATCT TTCTTGTACC 001040
001041 TTTATAAGCA GATCCTCCCA GGCTTCTGCA GTGTAGGAGA ACGGATATGG TTTTATTAAA AATAGTGTCT CAATTTCAAT 001120
001121 AGCTCTAAGT TCCCACCTGC TTGATGGCAG TGCTGAAGGG AGCCCCTCAG AGCCTCCTCT GCTATTCCAG GCATTCCAGG 001200
001201 GTGGCTTTGC AGGACAGCAA GGAGGAAATC TGCTCCTGGA CTTTGATTTC AACCTCATCT GCTGTCCACT GCCTGTACCA 001280
001281 CAGAAGGCAC CTTGATGAGA TATTGCTCCA TGGCTTTCAG ATCCTCTGAG AGAATAGGGG TCATGGATCT CTCCACTACA 001360
001361 ACTACATCTC ATTTCTGACT TTTTTTAAGT GCCTTTGAAA CCTCAACACT CTTCTTTGGG TAAATTAAGT AGTTCAATGA 001440
001441 GTAGGTCCCT CATTATTACT TTAAATAATC AAGAGTTCCA ACCTGATTTC TACAATCATT TTTATTTTGT CTCTAGTTAA 001520
001521 ATACTACTTG AATGAATGAG AGTGGTCTCT TTTTCCATAA CAATGCAATT TTAAATGTTT CAATACCTCA TTACCTTAGC 001600
001601 TTTGAAGCTT CTCTTACATT TTCTTTCTTA TATGTCAGTT CAAGAAACGG GCTTTCAGAG ACAAGTACAC TGACCCTCTC 001680
001681 AGCCAATGAT CCACCAAGTG ACTATTCCAC ACGTAGGCAG CTGTACACAT AGCCACTTGC CGGGGGGAAA GAAAATCAAT 001760
001761 TCATTCCAGA AGATTATTGA AGCTATTTTA TTTTTTCCTT CGGAGCTCTT CCTTCAGTGT GTGATTACAC ATGCACTCCT 001840
001841 TTGGGTGTTT TGTTTGAAAT CAAGGTTGTT TTATCCACCT GACCATATGT GCTATGAGCT CGGGGAGCAC ACCTGGTTGT 001920
001921 TCTCAGCATG TCACCCAGCT GGACCTGCAA AGAGTGCCAC ATATGCAGTA TCCATTGCCT GAACAAGTGA CTCCCTCTAA 002000
002001 AATTCACAAC AAAGCTAATA GCTGTTGTGC CTGAGGACAT ACAGCAAGTG CAGCCACAAA CATCAGGTCA GACATTAGAA 002080
002081 AGCGGCGCTC AAACTTCATG GCTTTCTAAG TCCCCATGCC ACCAACCCTT CTGGACAACA GCTGACTTCC ATTTCTAAAG 002160
002161 AACCATAAAA AGGTCATTGG TTTGCAAAAT CAAAATTTGT TCTGGGTGCT ACTGTGCCCT CATAAATGAA ATTTTGTTAT 002240
002241 TAAAGGAATG AACCTATTGG CAGTGTGCCT AGTCCCAGAG AACAAACAAT GTTTGGTGTC AGAGTGCTGC AGTCACTCTG 002320
002321 CAGAAGCAGA ATGGACATCA CCCAGAATTT GGTCCTGATG TTGAGACTGC TGACACCATA CGCACACCTA GGGGGTATGA 002400
002401 AATTGTTTAT TATTCACAAG AGAAGGCTTT CCTTCTGCCT CTAAATACAC TCTTTTCTCA CAAGGGTCGA AATGGCTTTC 002480
002481 ATTTTTGTAC AAAGTCCACA TCCCATACAC TCCCCCTTCT GAATGACTTT GAACTTAAAA TATGTTTGTT TGTTTAACTT 002560
002561 AAGCCACTTC AGTCCATTTA CTTCTTTACT TATCTCTTCC CTGCACCAAT TACTCACCCT CCTTTTAGTA GCAGCCATTA 002640
002641 ATATTCTCCA TTAATGGTCT CTTTCCAAAA CCTAGTCCCT CAGAAATTTC CTTCACCAAG ACTCTCCTTT GAAAATATCT 002720
002721 ACTCCCAAAG GTCTACACTC ATCTCTTTGA GCAGCATCTT TCCTAAATAT GTGTAATAAT AAATTTAGCC CTGGCTAAGA 002800
002801 AACTTGAAGA AGTGATCAAG GATCATTTTA AAGAAAAATG ATAAACAATG AACAAAAGGC AACCTGAGTC TGAAGAGTTT 002880
002881 AATAAAGGGC TCAGGCCGGG TTCAGTGGCT CATGCCCATA ATCCCAGCAC TTTGGGAGGC CGAGGCGGGT GGATCACCTG 002960
002961 AGATCAGGAG TTTGAGACCA GCCTGGCCAG CATGGTGAAA CCTCGTCTCT ACTAAAAGTA CAAAAATTAG CAGGGCGTGG 003040
003041 TGGTGCATGC CTGTAATCCC AGCTACTCAG GAGGCTGAGG CAGGAGAATC ACTTGAACTT TCTGTTTGTG ACACAAACAG 003120
003121 CCATTAGAGA GAAATGATTA GCTATTATAC TTCTCAGTGG TGGTTAGCAA TGGTCTATAA TTATTCATTT CTATTAGGAG 003200
003201 CCATTAGCCA TTAATTCCAT GTATTAGAAT TTTGAGAGCA GCTTGACCAC ATTGATTCCT GGGTCTACAT TTAAAATAGA 003280
003281 TGTGAGAGAG AGAGAGAGAC AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGATTAAA TGAGTTCGTT ATTGTTAAGC 003360
003361 ACTTAACTGT CATCATCATC ATCCCACAGA TGTAGACACC GATGTCCAGG TAGGCGATGT GATTTGTCCA AATCATAAAA 003440
003441 CTAGCATTAA GCACGCAGAA GAACCCAAAT CTCTTGACAA CTAGCCCTGA GTTCCTTCCA CTGTGCCATG CTGCCTGTAT 003520
003521 TGTTCTATAC TACGCCATAC TTTCTGATGC ATAAAGTCCT TATCAGGTAC ATAACTTATG AAGGAAAGAA CTCAGAAAGA 003600
003601 AGAAGGCCTA ATGATGCCAT TGATATAATA CCAGCATTAG ACATTGGTAG CCATACCTTG TGTCACCCCC CTAAACCCCA 003680
003681 TCTTTATTGA ATGAAGCAAG TGAAACATCA CCTTTCCCAG AATTGTGGAT AGGGTCTACA CAGGGAAATA ATAAGTGAAC 003760
003761 AAATGTGGGC TGAAAGCATA ATGGCTAATA ATATTTCCCA GAAGAGAAGA AAGAGGTGAG CTGTGTCTTT ACAGACATTG 003840
003841 CCAATAGGTA AGAGAGGGCA CAGAAACTCA AAGAAGCCTT AGATTTACTG AATGTAAGAG AAGGAAGAGG AGATGTTAGC 003920
003921 TTTTATCTTT TTTTCATAGC TTTTCCTGCA ACCTAGACAT TGTTTATATC ATTATCTTGG CTGTGTCACT AATTAGCAAT 004000
004001 TGATTTCTGA AAATTTAGCT CGTCATCAAT AAATGCTGTT CCTAAGTAGT CAATTAGAAT GAACATCTCC CAGGGATTTA 004080
004081 TGGGGTTATT AAGTCTGGAA GGTAGTCTTG GTGAAGGCAT ACATTAAGAC CTTGTATCCC AGGAGGATTA TCTGTGGTGA 004160
004161 CAGCAACAGG AGGTGAACCT GCTCAGCCCA GCTGTGGAGT TCAGCACCAG GCTGGTGAAT CCATCTTCCC AAGACCTCAT 004240
004241 GCTGTCACAG CCAGGAGACT TATGCTCTAA TTATGTGCCC CTTCTTTTGC AACCCCTACA GCTTAATGGG TTTCACATTC 004320
004321 TCTTAAGGTC TAATGTCCAT TTTTTTTTTT TCTTCTTTTC CTTTTAAAAA AAGATCCTAT ACTGACAACT CCAAATGCTG 004400
004401 GCAAGTTGAG GAGCAATAGG AACTGTCATT CATTGACTGG TGGGAATGTC AATGGTACAA CAATTTGGAA GACAGTATGG 004480
004481 CAGGTTATTA CTAAAGTGAG CATATTGTCA CTATAAATTC CAGTAAGTGT GCTCCTTGAC TTTGACCCAA ATTAGTTAAA 004560
004561 ATTTTATTTC CATAAAAAAT GTGGACATAG ATATTCATAG CAGCTTGATG GAAAGTTGTC AAAACTGGGA AGCAACTGAG 004640
004641 AAGCCCTTTA GTAGGCGTAG GAGTTATTAC ACTTTGGTAC ATACAAACAG TAGAATAAGA TTCAACACCA ATAAGAAATG 004720
004721 AGCTATTGTG CCACGAAAAG ACAAAGAGGA ATCTCAAATG CATATGACTA AGTGAAAGAA GCCAGTCTGA AAAGATGACT 004800
004801 TACCATATGA CATTCCAACC ATATGACATT CTGAAAAGCA AATATGGAGA GAAAAAGTGT GTAAAGAGCA ATGTTCTTTG 004880
004881 GAAAAACCAA TTAATTTTCA ACCATGAAAA AATGAAAACA GGTAAGTGCT AGAAGTAAAT GATGGATGAT TATTTTCATA 004960
004961 ATCTTAGGCA GAAAAAGTCT TTCTAAGAAG TTCTAAATTA AAACTTTGAT ATTTAAAAGA TTAAATATGT AATCCTTCAA 005040
005041 CATCAAAAAC ATAAAGATAA CAAAAATTAA AAGTAAATGA AGATCTGGGA AAATATACTT AGACCATATA TGATAATGAA 005120
005121 GTTAGCACTA TCATATATAA TGATATAATA AAGTCATATA TCGTAATGTC ATTGTTTCTA TAACATATAA AGAAATGTTA 005200
005201 TAAATCAAGG AAAAGATGAA CGCCTTAATA TAACGATAAG TTAAGAACAT GAAGCAATCT GAGAGACAAA TACAAAATGG 005280
005281 CAAACACAGG TTCAAGAAAA GTTTTACTTG GAGACAAATT TAGCATTCAT TACAATGGAT TGTCAACTGA AACTCATTGA 005360
005361 TTCAAATATG TTAAATATTT TAGATATATA CAACGTATCA AATCTTTTAG TATATTAATA TATAACAGAA ATATATATAT 005440
005441 TAAATGTGTA AGTTCATAAT GATATTTTGA AAAATGAAAA CCACACTAAT CATTTTTGGC TGTTGCTGGA CTCATTGCTC 005520
005521 TGAAATTGGA TAAATAAAGG TACAGAATAC AGCATTTACC TTGCCTCTCA TTTATGAACT GTGCTTCAGG TTAACCAAAT 005600
005601 AGATGTGAGG GAAAGTTCTT CTCCACAGAA GAATTCTAAT TAAAAAAGAA TGATTATTAG AAAAATAATT CGAAAAATGT 005680
005681 CATTTTGCAA CCCCTGCCGA GACAATGGAT TTTGGCAAGA ATCATAAATG GTAGTTGATG GGAAAATTGA TAATGGGTGA 005760
005761 ATGATGACAT CTAAACCCAT CAACTTCAGC ATCATGAAAA GTGGGACAAG TAGACATTGG GTGCCTGTTG ATTTAAACAC 005840
005841 TGCCCATAAA ATATTTTTGC CCCCTGAAAA AAATAAACCT AAATTTAATT GTGTTTCTTG ACTTAACTGC CAGTTAACAA 005920
005921 GAAATATGGG GTATATAAAC AATACCACAG GATACAATCA CATAAGACCA GGATGTGGGA AATTCAACTG GAAAAATGAC 006000
006001 ATATTTTAAA TGGCTTGAAA AAAAGGGGGA AGA
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Predicted Small Protein

Name NONHSAT081644_smProtein_1685:1981
Length 99
Molecular weight 10980.7888
Aromaticity 0.122448979592
Instability index 50.6796938776
Isoelectric point 7.73114013672
Runs 13
Runs residual 0.00638947167652
Runs probability 0.0503104914871
Amino acid sequence MIHQVTIPHVGSCTHSHLPGGKKINSFQKIIEAILFFPSELFLQCVITHALLWVFCLKSR
LFYPPDHMCYELGEHTWLFSACHPAGPAKSATYAVSIA
Secondary structure LEEEEELLLLLLLLLLLLLLLLLLHHHHHHHHHHHHLLHHHHHHHHHHHHHHHHHHHHHH
LLLLLLHHHHHLLLLLEEEELLLLLLLLLLLEEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLL
LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTooooooo
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