NONHSAT081692
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT081692 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
796 nt |
Genomic location |
chr21-:33063134..33065643 |
Exon number |
3 |
Exons |
33063134..33063266,33064130..33064755,33065607..33065643 |
Genome context |
|
Sequence |
000001 AAAGGCCTCC CTCAAGTGAA ACCGGAAACT GCAAGTGTAC TACCCTCTGG GTGGGGCAGC TGGACAAAAG AACTACTCAG 000080
000081 CAGGATGTTG CCAGTCTCTT GGAAGAGTTT GGTCCAATTG AATCAATTAA TGTGAGTGTT TATTCAGTTT TTTaagtacg 000160 000161 atggacaggt gtgattaatg tcattttatg aaatggagga cctgagacca aagttacaat ttgcccaggt ttataGATGT 000240 000241 GACTAGAATT TAGGTGTTCA GAGTCCACGT TTAGAATTAT CTGTATTTAA CATTTCTTAG AATTCTTTGT ATTTAACATT 000320 000321 TCTTGGATAA CCAAGTTTAA TTTCAAACAT TTCTAGGTAA GTCTTTATAT AACAAAGCTT GGAGGACTCA GTTGAGACCA 000400 000401 AACTTGAATT GCCAACTTAG AAATGAATTT AACCTTACAT TATATAGCAT GGGGTGAGGG ATGGGATTGT TGGAACTGCT 000480 000481 TACTTGGTGT TGTATCTTGT TGCTTTTCAA TTTTGTTATC TTTTATAATA TTAAAATGTT TTGGAGCAGA TGATTCCTCC 000560 000561 CAGGGGTTGT GCCTATATTG TTATGGTTCA TAGGCAAGAT GCCTATCGTG CCCTGCAGAA ACTGAGCCGA GGAAACTATA 000640 000641 AAGTGAACCA GAAATCCATA AAGATTGCCT GGGCCTTAAA CAAAGGAATA AAGGCAGATT ATAAGCAGTA TTGGGATGTA 000720 000721 GAACTTGGTG TTACTTATAT TCCATGGGAC AAAGTCAAGC CTGAGGAACT GGAGAGTTTT TGTGAAGGAG GAATGT |
Predicted Small Protein
Name | NONHSAT081692_smProtein_422:592 |
Length | 57 |
Molecular weight | 6234.2466 |
Aromaticity | 0.160714285714 |
Instability index | 46.4232142857 |
Isoelectric point | 4.21868896484 |
Runs | 7 |
Runs residual | 0.0282982045277 |
Runs probability | 0.0327932974992 |
Amino acid sequence | MNLTLHYIAWGEGWDCWNCLLGVVSCCFSILLSFIILKCFGADDSSQGLCLYCYGS |
Secondary structure | LLEEEEEELLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLEEEEEELL |
PRMN | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiii |