NONHSAT081752
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT081752 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
9124 nt |
Genomic location |
chr21+:34225334..34271862 |
Exon number |
3 |
Exons |
34225334..34225916,34239984..34240069,34263408..34271862 |
Genome context |
|
Sequence |
000001 AGTGCCGGGA TTGAAGGTGT GAGCCACCGC ACCTGGCCCA TATTCCTTTT TAAAGACAGC ATCAGAGTTC ATCATATAGA 000080
000081 TATTCTTTAA TTATATAATT AATCCCTTTT GTGGGCCATT TGTGGGGGTG CTCATTTTTT TCTTATTAGA AAGAAAGCTG 000160 000161 AAATCAATGT CTTGTACAAA TACCTTTTGT GTACTTCTCT GGTTAGCGCT TTAAGATAAA GACTTAAAAG AGGCATTGTT 000240 000241 AGCTCAAAGG ATATATATAT TTTCACATAT GTAGTTAAGC TGACCTCTGG AAATTTATCA TATTATGCAA ATCCTGTCAG 000320 000321 CTGCTTTTCA GGGGCAGGAA TGCAGTGGGG CAGGGAGGCC ATATTTACTT GTGACACAGG ATTTTTCTTG GCCACTTTGC 000400 000401 CAACTGGGGA CTTCCATGGC CAGTGACCCC CTCCCTGCCC AGACGTCGCT TAGCCCGGCC TGCCTCTGGA GGCGCCCTGC 000480 000481 CCACTTGGCC CACCAGTGTT ATAGCTTGTA CCCAAGTTTG GTGATTCCTA AGCTCTTGTG TCATGTCCAA GCAGAAAGAG 000560 000561 GATATGCTGC TGACAATTGA AGGGTTGGTT GATATACATT TTAGAGCTGG ACTGCTCAAT GTGGTACCCA GGCTAGCAGC 000640 000641 CACAATAGCA GCACCTGAGA GATGGTTTGT GAGCATATGT GTGATGGGAG GACAAGAATT GAGAAGATGG GATCAGGAAG 000720 000721 AGGAGGGAGG ACATATGATT ATCTATCTAT CTATCTACAC ACATGCATAT ATACATATAT ATACACACAC ATACATATGC 000800 000801 ACTATGTGTA TGTAACTCCC TGTGAAAATA TTTTCTATTC AACAAATTAA AAAAAAAAAA CTTTAGTCAG AAGTGAAATT 000880 000881 ACATAGAATT TGGGATGCCT TGCCATAAAT GGCCTCTCCA TAGTACCTCA TCCTGGCATC ACCTAAATGG GAGGGTTCTA 000960 000961 CCCCAATAGC TGAAAGCCCT GCCTGAGCCT TGGGGGCTCT GTGCTGTGGC CAGTGCTGGA CTATGCAGCT CTGGATGCCC 001040 001041 CCGACCTGCC GTTCCTCTGA CCACTCATGA GAAGCCCACA GGGGCAGCTC TGCCCCCTCA CCTTCTACTT CCATTGTTCC 001120 001121 CACTTTTAGA GACCAGAATT TTCCCCAAAC AAGTCAACAT CTTGCTGTGT TTGCAGAAAA CATCCTAGCA TTGGAGGGAC 001200 001201 TACCAGATGG AAAAATAGCT CCCCTTTTCC ATTTAGAAGT GGCTTGTTTG ATTTCAAAAT ATAAACCCTG TCCTAATAAT 001280 001281 AAAAATTACT TTTTTTCTCA GAGATGTGCC AAAGTCCCTC ACCATCTATC CACAGGAGAA TGTTCCATTT TTTTGGATGC 001360 001361 CTCATAGTCA CCTGGTGTGG GGGACAGACC CTGTGGTGGC CCCACGGTCC GCACCTCCTG GTATTCACAC CCTTGTGTGC 001440 001441 TGCCCTCCCC TTGAGTGTGG GCAGACCCTG TGACTTGCTT CATAGTAGAA TGTGACAAAG ATGATGGGCT GTCACTCCTG 001520 001521 GGCTTACGTT ACATCGTGCG AAACCCGACT TACAAACAGA TTTGCTTTTG TGCTCTTGCT GGCCTTGAAG AAGCAGGCTG 001600 001601 CCATGTCGCG AATTGTCCAT GCAGAGGCCA CATGGCACAT GAAGTGAGAA CCATAAAAGA AAAGTTGACA AATGGTAATG 001680 001681 ATGCCTAGGA AAGAAAGATA AAGAAAAAGG GGTGCAGGAA AAACAAGAGG CCCAGCACCA CAGAGTTAAA AGCAGTGTTT 001760 001761 TGCTGGCTAA TGCCAAACAT GGACAACCAA GCCACAGATT TTTCCATAGC CCGAGAAGTT TTGTTTTTCT CAATGAAAAA 001840 001841 TCAGAAGACT TTGCATTAAA GCATATCAGT GATATAGATA GCCTCAAATA ATCAAAAAGA ATTTACAAAG CTGTACAACT 001920 001921 CTGGTGTCAG TTAGCTTGGT GGAATGACAC TGTTGCTCTC TTTTCTGTCT AATGGGCATT TCCTTCTAAG ATATTAGTTC 002000 002001 TGCCTCCCAC GTATTGCTGC TACTGGATGC TTGACGGCTG TGAGTCTCAG GCATGGGGGA CTGACGGTTT TGGTGTGTGT 002080 002081 CTGGGTGAGC ACAAATTACC TGAATGCTGA TGTGGTAGGC GTCTCCTGGA AAGAACACTG TCTTTAATTG ACTTAATGTT 002160 002161 ATTTTCACCT GGATAAAAAT TTCAAATTTT TATACTATTT GTATTTTCTT TCCTTCTTTC TTCTTTCTTT TTTCTTTCTC 002240 002241 TTTCCTTTCT TCTTTTCTTT CTTTCTTTCT TTCTTTCTTT CTTTCTTTCT TTCTTTCTTT CTTTCTCTCT TTCTTTCTTT 002320 002321 CTTGCTCCCT GTCTCTCTCT CTCTCCCTTC CTTCCTTCCT AACTTCCTTT CTTCCCTCCT TCCTTCTTTC TTCCTTTTTC 002400 002401 TTTCTTCTTT CTTTCCTTTC TTTTCCTCTT TCTTTCTTTT CTTTTTTCTT TCTCCTTTCT TTCTTTCTTT TTTCTTTCTT 002480 002481 TCTTTCTTAC TTTCTCTTCC TTCCTTCTCT CTTCCTTCCT TTTCTTCCTT CTTTATTTCT CTCTGTCTCT CTCTTTCTGT 002560 002561 CTCTCTCTGT CTCTCTCCCT CTCTTTCTGT CTCCCCCTTT TTTTCTTCCT TTTCTCTTTT CTTCCTTTCA TGGGTCTCGT 002640 002641 TCTGTCACCC AGGCTGGAGT GCAGTGGTGC AATCCTCGCT CACTGCAGCC TCAAACTCCT GGGGCTCAAA TGATCCTCTC 002720 002721 ACCTCAGCCT CCTGAGTAAC TGGAACTACA GGTTTACGCT ATCACACCTG ACTAATTTTT AAATTTTTTG TAGAGATGGG 002800 002801 ATCTCACTAT GTTGCCTAGG CTAGTCTTGA ACTCTTGGCC TCAAGCAATC CTCCTGCCTC AGCCTCTCAA AGTGCTGGGA 002880 002881 TTACAGTCAC CCTGCCTGGC CCATTTTTTT TTCTTTAGGG AGCTAGGGGT GAGTGTTTTG CATTTTCGTT TCCTCTCTTG 002960 002961 TACTGTCAGC CTGGCTTCTG TTAGCACTCC TGTGTCTGGA GGACCAGGAA ATCCCAGCCT AGAAGACTAC CTAGAAGCTC 003040 003041 CTTCCTGGCC AGAGAGGAGG ACTGAGAACA CCATAGCAAA GGGCTGCTGT TCTGAGCATG AGCAGAACCC CCCTTAGACC 003120 003121 TAACTTCCTG CTTTTCCTCT ATGACAGCCT CGAGGTCTTT AGGAAAACGG TGACTCTGGA GCACAGCCCT GGATCCCTGA 003200 003201 TGGCAGGTGG ATGAATCTGC TCCCCACCTG GATGCTGCTA GTCCTTTCTC CAGGCTCCGT GACTGAAAAT GTGCTTTACT 003280 003281 TGGCAAAAGC TGTTTCTCCT CAGAACTCTA GAAATCAGAT CTTGGCCCAC CTCTTTCAGG TAAGGACCTT CTTAAAATTG 003360 003361 ATGCTTGACC CAACTAAATT TGAATTACAC CCTATCCCTC TTGGCCTTGT AAAATCGTAT GTATATATTT TGAGACGAAG 003440 003441 TCTTGCTCTG TTGCCTAGGC TGGCATACAG TGGTGTGAGC TCAGCTCACT GCAACCTCTA ACTCTGAGGT TCAAGTGATT 003520 003521 CTCCTGCCTC AGCCTCCCAA GTAGCTGGGA CTTACAGGCA CACACCATCA CGCCCAGATA ATTTTTCTAT TTTTAGTAGA 003600 003601 GATGGGGTTT CACCGTGTCG CCCAGACTGG TCTCGAACTC CTGAGCTCAA GTGATCCGCC CGCTTCAGCC TCCCAAAGTG 003680 003681 CTGGGATTAC AAATGTTAGC CACCACCCCT GGCCCATATA GAATTACTGT AGAGTTCAAA TTCTGGTTCT TGCATGTCCT 003760 003761 GGCTGTATGA CCTTGTGCAA GTTACTTAAC ATCTATGTGC CTCATTTTCC TCATCTGCAA AATTACCTCT CCTTGGTGTC 003840 003841 AGCATGAGGA TTAAATAAGA AAATGAAGTC TAAAGTTAGT ATCATTGGAA AAAGATAAAT CAGGTTCCCA TACTCATGGC 003920 003921 TTACTAAGTA TTAATTGGGG GGAGGAGGTT AATTCATTGT GTGGTCAGGA ATTCCTTTCA TGGATCAGTA ATCAACACAT 004000 004001 AAGTCCACCT TCATCTGGTT GGAAACTGTT GGTGATGGTG GGGAGGGGTC ATTTGTAGGA GGAGATATTT AGTCATGTGA 004080 004081 CTCATCACTG TTCTACCACA TATCCACAGG AGGCAGCCTT TAGGCTAGAA CTATGAAAGC AGTTAGGATG GAAAATTGGA 004160 004161 AAGTGGTTCC AGGGGACAGC CTAGGATAGA TACAGATTTT CAAAAATTGA GATTTAAATG TCAGCAACAT TGCTCATTAA 004240 004241 TTAACTTGTT TGACAAACAT TGAGTGCCAT ATCCTACCTT CTGGTCCCAT CAAAAGGAGT AAAACTCAGC CCTCATCCTC 004320 004321 AAGGAGCACT TAGATCAAGC CAACTTGTTG GTTTTTAAAT TGTATTTGAT AATGCATTGG ACTTTGCTAA ATTCTAGAGA 004400 004401 ATACTTACAA AATCAAATGC ATGTCTAATC ATGTAAAATG AGGGACACGT AAGAATAACC GGGTGTATTA GTTCATTCTC 004480 004481 ATGCTGCTAT AAAGAACTGC CTGAGATTAG GTAATTTATA AAAGAAAGAG GTTTAATTAA CTCACAGTTC TGAATGGCTG 004560 004561 GGGAGGCCTC AGGAACCTTA CAATCATGGT GGAAGGGGAA GCAAACACAT CCTTCTTCAC ATGCTAGCAG GAAGGATAAG 004640 004641 TGCTGAGCAA AAGGGGGAAA AGCCTCTTAT AAAACCATCA GATCTTGTGA GAACTCATTT ACTATCACAA AAATAGCAGC 004720 004721 ATGAGGGTAA CCGCCACCAT GATTCAATTA CCTCCCACTG GGTCCCTCCC ATGAAATGGG GGGATTATGG GAACTACAAT 004800 004801 TCAAGATGAG ATTCGGGTGG GGACGCAGCC AAACCATATC ACTGGAAGTG AATAGAATTT GTTGAGACAA ATTGAAGAGT 004880 004881 AATTTGTTTT ATTGAAGTGA GTGCAACTCA TTGGTATTTT ACTGTGTTCT GGGATCCAGG AGCCCAGTTT TTAGAACCTC 004960 004961 CTCCAACCAA GACCACTTCA TTATTCCAGC AGACTCACTG ACCCTTTCTT ATGTACAGTT TTCACTACTT TCCCAGATCC 005040 005041 CTTGTGTTTA GATCTGGCAA AAAAACTAGT TCTAGCCAAA GAAATATGCA CCCTGACCAA ACTTAGACAA TTGAGTATCT 005120 005121 GCTTTCCACA GGCTCTTTCT ATTTCACAGC AACCTTGCAG GCCATGTGTT AAAAATGGTG CTATACAAGA TGAAAGGAGT 005200 005201 CTGGGATCCT GAGTTACTGC TTGGGAGGGA AATTTTCAAT CTAAAATGGA TTGTGGTACA AGCAGAAATA AACCTGTCAT 005280 005281 GTGTTAAACC ACAGAGGTTT GGGGGATGTT TGTTACTGCA GCTTGTGTAG TTTACCCTGA CTAATATACT CTGTTACCAT 005360 005361 CCTTGCCAGG GCATATCTGG TCTTTCTATC TAATGCTACC TCTGGGTTTT AGTGGGAAAG AGGCCTCAAG GAAAGGGATT 005440 005441 CTGTATATCA ATGTTGACAT TTCTTCTTCC TATATATAGC TGAACATTGG AGAGATTATG TTTGTTTAGA AAAGTTTTCA 005520 005521 CAAATCCTTT GTCATGAAGA TTTCAGAGAA AGGTGACCAT GAATTGTGTT AAGGTGACTT TTTATACACC AATTAAATAA 005600 005601 CCTGATTCAA TGATTGCAGG GCATGAAGAG AAACGACAAC AGTCTTGGGT GTTCTGATCT GAGTAGCTTG TCAGTGCCTA 005680 005681 ATAGCTCCTT TGCTGCATGT AGATACAAAT GACCAATCTT ACACTTTTTT TTTTTTTTTT TTTTTTTTAC CCTCTCAAGC 005760 005761 TAGATTTTCT TTCCTCAAGA AAATGTGAAA ATGTCACTGG TCACAACCTC TAAGCCCTAT AAGTTTATGT CTTTATTTTA 005840 005841 TGTTCTGGAG AGAAAAAAAA ATTCACAATC AGAGAGAAAA GTAATTTTTC CGTTACTAAT AAGCTACGTA TGTGCAAAAG 005920 005921 GTTAGTTTTG GAATTTCTTT CAAAGATCCT GTGATTCAAA GTAAAATATT TGGTAAACTA TAATGAGGTA ATTGTGAGAA 006000 006001 ATGAGACATT AAAGTGTGTT TGGAGCCTTT TATATATTTC AACTTTAAAA ACAATTTGGT GTCTCCATCA TTAAAACTAA 006080 006081 ACTTTCACCT GCTACAGATC TCCTTCTTTG CTCCAAAGAC TATTGTTTGT TTGAACAGGG TGGAAAGGAG GTTGTCAGAG 006160 006161 GCCTTTTACA CAGTGCAAAT GAGAGCAGAA ATCAGCGGGG CCACAAGTGT TAATGAGAGA ATGGCTGCTG ATCAGAGCGT 006240 006241 GGACTTGGCC ACAGAAAGTT TATCTTGAAT TTTAGAAGTT TTTCAGTTGG TTATTGGTGG TTGCAATAAA ATAAATTACT 006320 006321 TCTAAAATAT AAATATTGAG TGAGTCATAA TGTCTTAAAT GATTATGACC ACAGTTTGCA GACCTTGTGT TGTAACTTAA 006400 006401 ACTTGACATT TAAGCATTCA GCCTGCATTT AGAATTTCTA AATCTTAATA TGTATTACTG CACACACATT TTGAAAAATA 006480 006481 TATAGATGAA TATATAGCAT TTATACCAAT ACATATAAAC ACATATTTCT TTTAAAAGAT AGGCAAATAC CATCATTTCT 006560 006561 TCACTGGTCA ACTCATGGAA GTCATGCTTA CTAATCAACT TTTCATGGAT CTAACATTTT ATGCATTCAT CTATAACACA 006640 006641 GCTTTTCCAT TGGATAATAA CTCATTTTAT CTTCAGGACA AGTTTGCATA TCAGGGATCA GTATCCTCAT TTTCTTTGCT 006720 006721 TTTGAGATGG AGTCTTGCTC TGTCGCCAGG CTGGAGTGCA GTGGCACTAT CTCGGCTCAC TGCAACCTCC GACTCCCTGG 006800 006801 ATCAAGTGAT TCTCCTGCCT CAGCCTCCCA AGTAGCTTGG ATTACAGGGA CATGCCACCA CGCCCAGCTA ATTTTTTTGT 006880 006881 ATTTTTAGTA GAGATGGGGT TTCACCATGT TGGTCAGGAT GGTCTCGATC TCCTGACCTT GTGATCCACC CGCCTCAGCC 006960 006961 TCCCAAAGTG CTGGGATTAC AGGCATGAGC CACCGCACCC AGCCATCCTC GTTTTCTAGA TGAGGAAACT GAGGCTCAGC 007040 007041 AAATGACATT GTTACTGAGA CAAATGTTTG AGCCAGGGAG GTGCTTGGAA AGACTATGGG GCTCTGAAGA GGGCAATTAA 007120 007121 ATTAAAATAA AGGGTGAGTT ATTGTGAATA TATGAACTAC TCTAAAAAGA TGAGAAATGT CACTCTCCCA CTCAAAGTAG 007200 007201 GGGAACTGGA TGAGTGCAGG ACCCTGAAAT GTGGAAAGGC ATTTAATGTA GGGAATGATG CTTATAAGAG GGTTTGAAGA 007280 007281 GCTAGAGCAG AAGGCAGAGG GCATCCCCTG TAACTATTAG CCAATAACTC CCCACTCTTC CTCTTCCAAG CCACTGGTAG 007360 007361 CTTCTAACCT ACTTTCTCTC TCTAGAAACT TGCCTATTCT AAAAATTTCA TACAAGTGGA ATAATACAAT CATACAACAT 007440 007441 TTGTCATTTT GTGCCTGGAT TATTTCACTT TATATAATAT TTCCAACATG TTACATGTTG TAGCATGCAC AGAACTTTCT 007520 007521 TTCTTTCCAT GTCTGAATAA TATTCCGTTG TATGGATATG CCACATTTTC TTTATCAATT CATCTGTTGA TAGATGCTTG 007600 007601 GGTTGTTTCC ATCAGATTGT CTTTTGATAT GACACATACT ATCCTCAGAT CTACCTCCCT CCCTTCCTCT TCCCCAAAGC 007680 007681 TGCTCAACCA GAGGCTTGGG TAACAATTGG CCACACCCAA CTTATCTAAG TCTGTTCTGT CCTCCATTCA GATGGGAGCC 007760 007761 CACCCTTCAA GACGACTATA TAGAAAATAA AACTATTGTC CTGAGAGACC ATCTTTCTTG CTATTTGGCA CCCACTATAA 007840 007841 ATCCTCATGG GCTATATCCT TTTGAGAGAC ACCATCATTT TAAATTTGAA GATGTGCTAT TTATTGTTGT TTTTCAGCTC 007920 007921 CAGACTCACC CTTCTAAATT CTGCTCTATG CTATTGGATT GGAGCAGAGG TTTTACAAAC CACATGTTCA CTTTCCCTGC 008000 008001 AGGCTCCATG TTAGGCTCTG CCAAGAGGGT GTACTGAAGA GAAGCTAAAA GATTGGAGCA GAAAAAAGGA ACCTGCTCCT 008080 008081 TCTTGTTTGC TTCCTGTCCC TCTCTGCATC ACCCAAGCAT GCTTCTTCAC CCCAGCAGCA GCAGTTCTTT CACACAGTAG 008160 008161 GAGCTGCATG CAGTGAGCGG TGTTTCCAAC AGTTATAGAT CCTACCTCAT TGTACCACTC CCCCACCTTG AGGACCAGCA 008240 008241 CTAGCTGGCA GGAGCATCTT CCTCACAGAA CTGAATTTAA GCCCTACAAG GTCCCTCTTG TTAGCCCAGA AACATCATCA 008320 008321 GCAGTTGGGC AGGGCCCTGT CCTCTGAGAT CTGAGTTTCT GTTCCTCAGA GTCATTACAT TATATGTTTT AAAAATAGCT 008400 008401 CTTCCCTTTG TTTCTGCCAG CCCTAAGGTG GTGCTGCTTC TTGTAGTTGC TACTTCCATC TGTGACTTTC CAGTTAACTT 008480 008481 TTAAACAATT TTATAACTAG TTAACAGCTA TTTGTGTTAA ATTCTCACTT TAAGTCCTCG GTTATAAGGT GTCTTCTCCC 008560 008561 CGTCCTCTCC CAGACCATAC ACAATACATG GACATCGCAC ACATACTGCA TGTGCATATG GAGTAGGAAC ATTCCCAATC 008640 008641 AAGATAGTGA ATATACTGTG GAGGGCTTTA GAGTGAGGCC AGACCCCATG GATCCAGGGA CCTTCCCTGA AAAGGACTGA 008720 008721 AGCCCACTGT GGTCATTGAA GAACAGTGGA AAGCTCTGGT GGGAACTGCG CAAGTAGAAG TTCCTCCAGA TCAGGAACCT 008800 008801 TTTCTGTCTC TTGACAAGGT AATATTGAGG AGTCTAAGAG AGGGTGGTCA AGGTCAGGCA GTCCCAGGTG ATGGAAGAAA 008880 008881 GGTGGCTTCT GAGGAATGGT ATCAGACCTT CATGTCTCCT TTCTTCTGTG GTGCCCATAA ACAAAGATTG GCTTAAACAT 008960 008961 ACCAACTTAG TTCTACTAGG GCAGATTAGG TGATGGGTCC TGTACCCATC TAACATTAGA TACCAGAATC AAATGTTAGA 009040 009041 AGGGAGCAGT GACTCCCTCC CCCAGGGGTG AGTGGCAGCT ATAATTCATA AGAACTTTCC ACTGGGGAAG GTGAATCGGT 009120 009121 CCAA |
Predicted Small Protein
Name | NONHSAT081752_smProtein_542:814 |
Length | 91 |
Molecular weight | 10431.1261 |
Aromaticity | 0.1 |
Instability index | 73.7777777778 |
Isoelectric point | 5.88336181641 |
Runs | 17 |
Runs residual | 0.0490299823633 |
Runs probability | 0.0323576171327 |
Amino acid sequence | MSKQKEDMLLTIEGLVDIHFRAGLLNVVPRLAATIAAPERWFVSICVMGGQELRRWDQEE EGGHMIIYLSIYTHAYIHIYTHTYICTMCM |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHLLLLLEEEEEELLLLEEEELLHHH LLLEEEEEEEELLLLEEEEELEEEEEEEEL |
PRMN | - |
PiMo | - |