NONHSAT081752

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT081752

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

9124 nt

Genomic location

chr21+:34225334..34271862

Exon number

3

Exons

34225334..34225916,34239984..34240069,34263408..34271862

Genome context

Sequence
000001 AGTGCCGGGA TTGAAGGTGT GAGCCACCGC ACCTGGCCCA TATTCCTTTT TAAAGACAGC ATCAGAGTTC ATCATATAGA 000080
000081 TATTCTTTAA TTATATAATT AATCCCTTTT GTGGGCCATT TGTGGGGGTG CTCATTTTTT TCTTATTAGA AAGAAAGCTG 000160
000161 AAATCAATGT CTTGTACAAA TACCTTTTGT GTACTTCTCT GGTTAGCGCT TTAAGATAAA GACTTAAAAG AGGCATTGTT 000240
000241 AGCTCAAAGG ATATATATAT TTTCACATAT GTAGTTAAGC TGACCTCTGG AAATTTATCA TATTATGCAA ATCCTGTCAG 000320
000321 CTGCTTTTCA GGGGCAGGAA TGCAGTGGGG CAGGGAGGCC ATATTTACTT GTGACACAGG ATTTTTCTTG GCCACTTTGC 000400
000401 CAACTGGGGA CTTCCATGGC CAGTGACCCC CTCCCTGCCC AGACGTCGCT TAGCCCGGCC TGCCTCTGGA GGCGCCCTGC 000480
000481 CCACTTGGCC CACCAGTGTT ATAGCTTGTA CCCAAGTTTG GTGATTCCTA AGCTCTTGTG TCATGTCCAA GCAGAAAGAG 000560
000561 GATATGCTGC TGACAATTGA AGGGTTGGTT GATATACATT TTAGAGCTGG ACTGCTCAAT GTGGTACCCA GGCTAGCAGC 000640
000641 CACAATAGCA GCACCTGAGA GATGGTTTGT GAGCATATGT GTGATGGGAG GACAAGAATT GAGAAGATGG GATCAGGAAG 000720
000721 AGGAGGGAGG ACATATGATT ATCTATCTAT CTATCTACAC ACATGCATAT ATACATATAT ATACACACAC ATACATATGC 000800
000801 ACTATGTGTA TGTAACTCCC TGTGAAAATA TTTTCTATTC AACAAATTAA AAAAAAAAAA CTTTAGTCAG AAGTGAAATT 000880
000881 ACATAGAATT TGGGATGCCT TGCCATAAAT GGCCTCTCCA TAGTACCTCA TCCTGGCATC ACCTAAATGG GAGGGTTCTA 000960
000961 CCCCAATAGC TGAAAGCCCT GCCTGAGCCT TGGGGGCTCT GTGCTGTGGC CAGTGCTGGA CTATGCAGCT CTGGATGCCC 001040
001041 CCGACCTGCC GTTCCTCTGA CCACTCATGA GAAGCCCACA GGGGCAGCTC TGCCCCCTCA CCTTCTACTT CCATTGTTCC 001120
001121 CACTTTTAGA GACCAGAATT TTCCCCAAAC AAGTCAACAT CTTGCTGTGT TTGCAGAAAA CATCCTAGCA TTGGAGGGAC 001200
001201 TACCAGATGG AAAAATAGCT CCCCTTTTCC ATTTAGAAGT GGCTTGTTTG ATTTCAAAAT ATAAACCCTG TCCTAATAAT 001280
001281 AAAAATTACT TTTTTTCTCA GAGATGTGCC AAAGTCCCTC ACCATCTATC CACAGGAGAA TGTTCCATTT TTTTGGATGC 001360
001361 CTCATAGTCA CCTGGTGTGG GGGACAGACC CTGTGGTGGC CCCACGGTCC GCACCTCCTG GTATTCACAC CCTTGTGTGC 001440
001441 TGCCCTCCCC TTGAGTGTGG GCAGACCCTG TGACTTGCTT CATAGTAGAA TGTGACAAAG ATGATGGGCT GTCACTCCTG 001520
001521 GGCTTACGTT ACATCGTGCG AAACCCGACT TACAAACAGA TTTGCTTTTG TGCTCTTGCT GGCCTTGAAG AAGCAGGCTG 001600
001601 CCATGTCGCG AATTGTCCAT GCAGAGGCCA CATGGCACAT GAAGTGAGAA CCATAAAAGA AAAGTTGACA AATGGTAATG 001680
001681 ATGCCTAGGA AAGAAAGATA AAGAAAAAGG GGTGCAGGAA AAACAAGAGG CCCAGCACCA CAGAGTTAAA AGCAGTGTTT 001760
001761 TGCTGGCTAA TGCCAAACAT GGACAACCAA GCCACAGATT TTTCCATAGC CCGAGAAGTT TTGTTTTTCT CAATGAAAAA 001840
001841 TCAGAAGACT TTGCATTAAA GCATATCAGT GATATAGATA GCCTCAAATA ATCAAAAAGA ATTTACAAAG CTGTACAACT 001920
001921 CTGGTGTCAG TTAGCTTGGT GGAATGACAC TGTTGCTCTC TTTTCTGTCT AATGGGCATT TCCTTCTAAG ATATTAGTTC 002000
002001 TGCCTCCCAC GTATTGCTGC TACTGGATGC TTGACGGCTG TGAGTCTCAG GCATGGGGGA CTGACGGTTT TGGTGTGTGT 002080
002081 CTGGGTGAGC ACAAATTACC TGAATGCTGA TGTGGTAGGC GTCTCCTGGA AAGAACACTG TCTTTAATTG ACTTAATGTT 002160
002161 ATTTTCACCT GGATAAAAAT TTCAAATTTT TATACTATTT GTATTTTCTT TCCTTCTTTC TTCTTTCTTT TTTCTTTCTC 002240
002241 TTTCCTTTCT TCTTTTCTTT CTTTCTTTCT TTCTTTCTTT CTTTCTTTCT TTCTTTCTTT CTTTCTCTCT TTCTTTCTTT 002320
002321 CTTGCTCCCT GTCTCTCTCT CTCTCCCTTC CTTCCTTCCT AACTTCCTTT CTTCCCTCCT TCCTTCTTTC TTCCTTTTTC 002400
002401 TTTCTTCTTT CTTTCCTTTC TTTTCCTCTT TCTTTCTTTT CTTTTTTCTT TCTCCTTTCT TTCTTTCTTT TTTCTTTCTT 002480
002481 TCTTTCTTAC TTTCTCTTCC TTCCTTCTCT CTTCCTTCCT TTTCTTCCTT CTTTATTTCT CTCTGTCTCT CTCTTTCTGT 002560
002561 CTCTCTCTGT CTCTCTCCCT CTCTTTCTGT CTCCCCCTTT TTTTCTTCCT TTTCTCTTTT CTTCCTTTCA TGGGTCTCGT 002640
002641 TCTGTCACCC AGGCTGGAGT GCAGTGGTGC AATCCTCGCT CACTGCAGCC TCAAACTCCT GGGGCTCAAA TGATCCTCTC 002720
002721 ACCTCAGCCT CCTGAGTAAC TGGAACTACA GGTTTACGCT ATCACACCTG ACTAATTTTT AAATTTTTTG TAGAGATGGG 002800
002801 ATCTCACTAT GTTGCCTAGG CTAGTCTTGA ACTCTTGGCC TCAAGCAATC CTCCTGCCTC AGCCTCTCAA AGTGCTGGGA 002880
002881 TTACAGTCAC CCTGCCTGGC CCATTTTTTT TTCTTTAGGG AGCTAGGGGT GAGTGTTTTG CATTTTCGTT TCCTCTCTTG 002960
002961 TACTGTCAGC CTGGCTTCTG TTAGCACTCC TGTGTCTGGA GGACCAGGAA ATCCCAGCCT AGAAGACTAC CTAGAAGCTC 003040
003041 CTTCCTGGCC AGAGAGGAGG ACTGAGAACA CCATAGCAAA GGGCTGCTGT TCTGAGCATG AGCAGAACCC CCCTTAGACC 003120
003121 TAACTTCCTG CTTTTCCTCT ATGACAGCCT CGAGGTCTTT AGGAAAACGG TGACTCTGGA GCACAGCCCT GGATCCCTGA 003200
003201 TGGCAGGTGG ATGAATCTGC TCCCCACCTG GATGCTGCTA GTCCTTTCTC CAGGCTCCGT GACTGAAAAT GTGCTTTACT 003280
003281 TGGCAAAAGC TGTTTCTCCT CAGAACTCTA GAAATCAGAT CTTGGCCCAC CTCTTTCAGG TAAGGACCTT CTTAAAATTG 003360
003361 ATGCTTGACC CAACTAAATT TGAATTACAC CCTATCCCTC TTGGCCTTGT AAAATCGTAT GTATATATTT TGAGACGAAG 003440
003441 TCTTGCTCTG TTGCCTAGGC TGGCATACAG TGGTGTGAGC TCAGCTCACT GCAACCTCTA ACTCTGAGGT TCAAGTGATT 003520
003521 CTCCTGCCTC AGCCTCCCAA GTAGCTGGGA CTTACAGGCA CACACCATCA CGCCCAGATA ATTTTTCTAT TTTTAGTAGA 003600
003601 GATGGGGTTT CACCGTGTCG CCCAGACTGG TCTCGAACTC CTGAGCTCAA GTGATCCGCC CGCTTCAGCC TCCCAAAGTG 003680
003681 CTGGGATTAC AAATGTTAGC CACCACCCCT GGCCCATATA GAATTACTGT AGAGTTCAAA TTCTGGTTCT TGCATGTCCT 003760
003761 GGCTGTATGA CCTTGTGCAA GTTACTTAAC ATCTATGTGC CTCATTTTCC TCATCTGCAA AATTACCTCT CCTTGGTGTC 003840
003841 AGCATGAGGA TTAAATAAGA AAATGAAGTC TAAAGTTAGT ATCATTGGAA AAAGATAAAT CAGGTTCCCA TACTCATGGC 003920
003921 TTACTAAGTA TTAATTGGGG GGAGGAGGTT AATTCATTGT GTGGTCAGGA ATTCCTTTCA TGGATCAGTA ATCAACACAT 004000
004001 AAGTCCACCT TCATCTGGTT GGAAACTGTT GGTGATGGTG GGGAGGGGTC ATTTGTAGGA GGAGATATTT AGTCATGTGA 004080
004081 CTCATCACTG TTCTACCACA TATCCACAGG AGGCAGCCTT TAGGCTAGAA CTATGAAAGC AGTTAGGATG GAAAATTGGA 004160
004161 AAGTGGTTCC AGGGGACAGC CTAGGATAGA TACAGATTTT CAAAAATTGA GATTTAAATG TCAGCAACAT TGCTCATTAA 004240
004241 TTAACTTGTT TGACAAACAT TGAGTGCCAT ATCCTACCTT CTGGTCCCAT CAAAAGGAGT AAAACTCAGC CCTCATCCTC 004320
004321 AAGGAGCACT TAGATCAAGC CAACTTGTTG GTTTTTAAAT TGTATTTGAT AATGCATTGG ACTTTGCTAA ATTCTAGAGA 004400
004401 ATACTTACAA AATCAAATGC ATGTCTAATC ATGTAAAATG AGGGACACGT AAGAATAACC GGGTGTATTA GTTCATTCTC 004480
004481 ATGCTGCTAT AAAGAACTGC CTGAGATTAG GTAATTTATA AAAGAAAGAG GTTTAATTAA CTCACAGTTC TGAATGGCTG 004560
004561 GGGAGGCCTC AGGAACCTTA CAATCATGGT GGAAGGGGAA GCAAACACAT CCTTCTTCAC ATGCTAGCAG GAAGGATAAG 004640
004641 TGCTGAGCAA AAGGGGGAAA AGCCTCTTAT AAAACCATCA GATCTTGTGA GAACTCATTT ACTATCACAA AAATAGCAGC 004720
004721 ATGAGGGTAA CCGCCACCAT GATTCAATTA CCTCCCACTG GGTCCCTCCC ATGAAATGGG GGGATTATGG GAACTACAAT 004800
004801 TCAAGATGAG ATTCGGGTGG GGACGCAGCC AAACCATATC ACTGGAAGTG AATAGAATTT GTTGAGACAA ATTGAAGAGT 004880
004881 AATTTGTTTT ATTGAAGTGA GTGCAACTCA TTGGTATTTT ACTGTGTTCT GGGATCCAGG AGCCCAGTTT TTAGAACCTC 004960
004961 CTCCAACCAA GACCACTTCA TTATTCCAGC AGACTCACTG ACCCTTTCTT ATGTACAGTT TTCACTACTT TCCCAGATCC 005040
005041 CTTGTGTTTA GATCTGGCAA AAAAACTAGT TCTAGCCAAA GAAATATGCA CCCTGACCAA ACTTAGACAA TTGAGTATCT 005120
005121 GCTTTCCACA GGCTCTTTCT ATTTCACAGC AACCTTGCAG GCCATGTGTT AAAAATGGTG CTATACAAGA TGAAAGGAGT 005200
005201 CTGGGATCCT GAGTTACTGC TTGGGAGGGA AATTTTCAAT CTAAAATGGA TTGTGGTACA AGCAGAAATA AACCTGTCAT 005280
005281 GTGTTAAACC ACAGAGGTTT GGGGGATGTT TGTTACTGCA GCTTGTGTAG TTTACCCTGA CTAATATACT CTGTTACCAT 005360
005361 CCTTGCCAGG GCATATCTGG TCTTTCTATC TAATGCTACC TCTGGGTTTT AGTGGGAAAG AGGCCTCAAG GAAAGGGATT 005440
005441 CTGTATATCA ATGTTGACAT TTCTTCTTCC TATATATAGC TGAACATTGG AGAGATTATG TTTGTTTAGA AAAGTTTTCA 005520
005521 CAAATCCTTT GTCATGAAGA TTTCAGAGAA AGGTGACCAT GAATTGTGTT AAGGTGACTT TTTATACACC AATTAAATAA 005600
005601 CCTGATTCAA TGATTGCAGG GCATGAAGAG AAACGACAAC AGTCTTGGGT GTTCTGATCT GAGTAGCTTG TCAGTGCCTA 005680
005681 ATAGCTCCTT TGCTGCATGT AGATACAAAT GACCAATCTT ACACTTTTTT TTTTTTTTTT TTTTTTTTAC CCTCTCAAGC 005760
005761 TAGATTTTCT TTCCTCAAGA AAATGTGAAA ATGTCACTGG TCACAACCTC TAAGCCCTAT AAGTTTATGT CTTTATTTTA 005840
005841 TGTTCTGGAG AGAAAAAAAA ATTCACAATC AGAGAGAAAA GTAATTTTTC CGTTACTAAT AAGCTACGTA TGTGCAAAAG 005920
005921 GTTAGTTTTG GAATTTCTTT CAAAGATCCT GTGATTCAAA GTAAAATATT TGGTAAACTA TAATGAGGTA ATTGTGAGAA 006000
006001 ATGAGACATT AAAGTGTGTT TGGAGCCTTT TATATATTTC AACTTTAAAA ACAATTTGGT GTCTCCATCA TTAAAACTAA 006080
006081 ACTTTCACCT GCTACAGATC TCCTTCTTTG CTCCAAAGAC TATTGTTTGT TTGAACAGGG TGGAAAGGAG GTTGTCAGAG 006160
006161 GCCTTTTACA CAGTGCAAAT GAGAGCAGAA ATCAGCGGGG CCACAAGTGT TAATGAGAGA ATGGCTGCTG ATCAGAGCGT 006240
006241 GGACTTGGCC ACAGAAAGTT TATCTTGAAT TTTAGAAGTT TTTCAGTTGG TTATTGGTGG TTGCAATAAA ATAAATTACT 006320
006321 TCTAAAATAT AAATATTGAG TGAGTCATAA TGTCTTAAAT GATTATGACC ACAGTTTGCA GACCTTGTGT TGTAACTTAA 006400
006401 ACTTGACATT TAAGCATTCA GCCTGCATTT AGAATTTCTA AATCTTAATA TGTATTACTG CACACACATT TTGAAAAATA 006480
006481 TATAGATGAA TATATAGCAT TTATACCAAT ACATATAAAC ACATATTTCT TTTAAAAGAT AGGCAAATAC CATCATTTCT 006560
006561 TCACTGGTCA ACTCATGGAA GTCATGCTTA CTAATCAACT TTTCATGGAT CTAACATTTT ATGCATTCAT CTATAACACA 006640
006641 GCTTTTCCAT TGGATAATAA CTCATTTTAT CTTCAGGACA AGTTTGCATA TCAGGGATCA GTATCCTCAT TTTCTTTGCT 006720
006721 TTTGAGATGG AGTCTTGCTC TGTCGCCAGG CTGGAGTGCA GTGGCACTAT CTCGGCTCAC TGCAACCTCC GACTCCCTGG 006800
006801 ATCAAGTGAT TCTCCTGCCT CAGCCTCCCA AGTAGCTTGG ATTACAGGGA CATGCCACCA CGCCCAGCTA ATTTTTTTGT 006880
006881 ATTTTTAGTA GAGATGGGGT TTCACCATGT TGGTCAGGAT GGTCTCGATC TCCTGACCTT GTGATCCACC CGCCTCAGCC 006960
006961 TCCCAAAGTG CTGGGATTAC AGGCATGAGC CACCGCACCC AGCCATCCTC GTTTTCTAGA TGAGGAAACT GAGGCTCAGC 007040
007041 AAATGACATT GTTACTGAGA CAAATGTTTG AGCCAGGGAG GTGCTTGGAA AGACTATGGG GCTCTGAAGA GGGCAATTAA 007120
007121 ATTAAAATAA AGGGTGAGTT ATTGTGAATA TATGAACTAC TCTAAAAAGA TGAGAAATGT CACTCTCCCA CTCAAAGTAG 007200
007201 GGGAACTGGA TGAGTGCAGG ACCCTGAAAT GTGGAAAGGC ATTTAATGTA GGGAATGATG CTTATAAGAG GGTTTGAAGA 007280
007281 GCTAGAGCAG AAGGCAGAGG GCATCCCCTG TAACTATTAG CCAATAACTC CCCACTCTTC CTCTTCCAAG CCACTGGTAG 007360
007361 CTTCTAACCT ACTTTCTCTC TCTAGAAACT TGCCTATTCT AAAAATTTCA TACAAGTGGA ATAATACAAT CATACAACAT 007440
007441 TTGTCATTTT GTGCCTGGAT TATTTCACTT TATATAATAT TTCCAACATG TTACATGTTG TAGCATGCAC AGAACTTTCT 007520
007521 TTCTTTCCAT GTCTGAATAA TATTCCGTTG TATGGATATG CCACATTTTC TTTATCAATT CATCTGTTGA TAGATGCTTG 007600
007601 GGTTGTTTCC ATCAGATTGT CTTTTGATAT GACACATACT ATCCTCAGAT CTACCTCCCT CCCTTCCTCT TCCCCAAAGC 007680
007681 TGCTCAACCA GAGGCTTGGG TAACAATTGG CCACACCCAA CTTATCTAAG TCTGTTCTGT CCTCCATTCA GATGGGAGCC 007760
007761 CACCCTTCAA GACGACTATA TAGAAAATAA AACTATTGTC CTGAGAGACC ATCTTTCTTG CTATTTGGCA CCCACTATAA 007840
007841 ATCCTCATGG GCTATATCCT TTTGAGAGAC ACCATCATTT TAAATTTGAA GATGTGCTAT TTATTGTTGT TTTTCAGCTC 007920
007921 CAGACTCACC CTTCTAAATT CTGCTCTATG CTATTGGATT GGAGCAGAGG TTTTACAAAC CACATGTTCA CTTTCCCTGC 008000
008001 AGGCTCCATG TTAGGCTCTG CCAAGAGGGT GTACTGAAGA GAAGCTAAAA GATTGGAGCA GAAAAAAGGA ACCTGCTCCT 008080
008081 TCTTGTTTGC TTCCTGTCCC TCTCTGCATC ACCCAAGCAT GCTTCTTCAC CCCAGCAGCA GCAGTTCTTT CACACAGTAG 008160
008161 GAGCTGCATG CAGTGAGCGG TGTTTCCAAC AGTTATAGAT CCTACCTCAT TGTACCACTC CCCCACCTTG AGGACCAGCA 008240
008241 CTAGCTGGCA GGAGCATCTT CCTCACAGAA CTGAATTTAA GCCCTACAAG GTCCCTCTTG TTAGCCCAGA AACATCATCA 008320
008321 GCAGTTGGGC AGGGCCCTGT CCTCTGAGAT CTGAGTTTCT GTTCCTCAGA GTCATTACAT TATATGTTTT AAAAATAGCT 008400
008401 CTTCCCTTTG TTTCTGCCAG CCCTAAGGTG GTGCTGCTTC TTGTAGTTGC TACTTCCATC TGTGACTTTC CAGTTAACTT 008480
008481 TTAAACAATT TTATAACTAG TTAACAGCTA TTTGTGTTAA ATTCTCACTT TAAGTCCTCG GTTATAAGGT GTCTTCTCCC 008560
008561 CGTCCTCTCC CAGACCATAC ACAATACATG GACATCGCAC ACATACTGCA TGTGCATATG GAGTAGGAAC ATTCCCAATC 008640
008641 AAGATAGTGA ATATACTGTG GAGGGCTTTA GAGTGAGGCC AGACCCCATG GATCCAGGGA CCTTCCCTGA AAAGGACTGA 008720
008721 AGCCCACTGT GGTCATTGAA GAACAGTGGA AAGCTCTGGT GGGAACTGCG CAAGTAGAAG TTCCTCCAGA TCAGGAACCT 008800
008801 TTTCTGTCTC TTGACAAGGT AATATTGAGG AGTCTAAGAG AGGGTGGTCA AGGTCAGGCA GTCCCAGGTG ATGGAAGAAA 008880
008881 GGTGGCTTCT GAGGAATGGT ATCAGACCTT CATGTCTCCT TTCTTCTGTG GTGCCCATAA ACAAAGATTG GCTTAAACAT 008960
008961 ACCAACTTAG TTCTACTAGG GCAGATTAGG TGATGGGTCC TGTACCCATC TAACATTAGA TACCAGAATC AAATGTTAGA 009040
009041 AGGGAGCAGT GACTCCCTCC CCCAGGGGTG AGTGGCAGCT ATAATTCATA AGAACTTTCC ACTGGGGAAG GTGAATCGGT 009120
009121 CCAA
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Predicted Small Protein

Name NONHSAT081752_smProtein_542:814
Length 91
Molecular weight 10431.1261
Aromaticity 0.1
Instability index 73.7777777778
Isoelectric point 5.88336181641
Runs 17
Runs residual 0.0490299823633
Runs probability 0.0323576171327
Amino acid sequence MSKQKEDMLLTIEGLVDIHFRAGLLNVVPRLAATIAAPERWFVSICVMGGQELRRWDQEE
EGGHMIIYLSIYTHAYIHIYTHTYICTMCM
Secondary structure LLLHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHLLLLLEEEEEELLLLEEEELLHHH
LLLEEEEEEEELLLLEEEEELEEEEEEEEL
PRMN -
PiMo -