NONHSAT081784
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT081784 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
481 nt |
Genomic location |
chr21-:34804828..34811609 |
Exon number |
3 |
Exons |
34804828..34805109,34809190..34809299,34811521..34811609 |
Genome context |
|
Sequence |
000001 TATAGATGTA TCCTCCACTC CTCGCTGGCC ACCATCCTGC TGCCCAACAG AAGAAGCTCT TCTGTCTCCG ATTTCCTGAA 000080
000081 CGGTCTAAGG GAGCCAGTGG GCTAGGCCCA TGCTTTGGTT CAAAGCGTTT GGAGAACATC TTCTTGCTCC TTTTCCGGAA 000160 000161 ACGAGATAAT GGACACAGAG TCCCAGACGT CATCCTTTGG ACCAGGAAGA AACAGGCTCC TGCCAGCACC GACAGCAACG 000240 000241 AAAATGTTCC CACGGAGATC AGGATGACTT GCTGAAGCTC AGTGGAGGCT AAAAAGAGGA CACGAAAGTG AACAGAATGA 000320 000321 TCTTCCTACG CACAACACAA ACATCAGTTA ATGTTCCATC CATGCTGCTT AAAGAGCATT CCTGTCCTAG TAAAATGGGC 000400 000401 AAGTCCCTCT ACCCCCCACC CTCACCTGGT ATGCTTACAT TAATAGCTAA AGTCAATCCT GTAATGAAAT AAAGCAAGTG 000480 000481 G |
Predicted Small Protein
Name | NONHSAT081784_smProtein_5:274 |
Length | 90 |
Molecular weight | 10089.6546 |
Aromaticity | 0.0786516853933 |
Instability index | 60.1202247191 |
Isoelectric point | 10.0364379883 |
Runs | 11 |
Runs residual | 0.0196078431373 |
Runs probability | 0.0469560469562 |
Amino acid sequence | MYPPLLAGHHPAAQQKKLFCLRFPERSKGASGLGPCFGSKRLENIFLLLFRKRDNGHRVP DVILWTRKKQAPASTDSNENVPTEIRMTC |
Secondary structure | LLLLLLLLLLHHHHHLLLEEELLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHLLLLLLL LEEEEELLLLLLLLLLLLLLLLLEEEEEL |
PRMN | - |
PiMo | - |