NONHSAT081858
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT081858 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1367 nt |
Genomic location |
chr21+:35537243..35538609 |
Exon number |
1 |
Exons |
35537243..35538609 |
Genome context |
|
Sequence |
000001 gagtgcagtg gcgcagtctt ggcccactgc aagctctgcc tcccagattc atgccattct cctgcctcag cctcctgagt 000080
000081 agctgggact acaggtaccc gccaccacgc ctggctaatt ttttgtatgt ttttagtagt gacagggttt caccatgtta 000160 000161 gccaggatgg tctcaatctc ctgatctcgt gatccacctg ccttggcctc ccaaagtgct gggattacag gcgtgagcca 000240 000241 ccgtgcccgg cctaaatttt gtttttaaga gaagttacta tttattccta attagatgga ggggaaagtt tttgaagagg 000320 000321 aatctttgct ttttacaggt ataatactct tgaatttagc taatatgttt gcatagagac cctcttctgc aagattaact 000400 000401 tccacaattc ttccacttct tcttcgaacc ttcagcttct tcctaattta actcaaaaca atctttaaac cctaggtaaa 000480 000481 ggtttacatt tccatgtctt cttataactt ttcaccaaaa aaccacattt tactgttctt acacaccttg cttgtaaatc 000560 000561 tatttctagt agtttcaatt aactcctagc aatttttaac tttaaggtaa aacttggtaa cttgctttaa ttgtgtgcta 000640 000641 agtgcagcca aggtttgact ccagcataat taagggcata gctaattcca tgtcctcagt ccctaccagt tgtgaagctg 000720 000721 acaagtcaaa tagttctcaa aaccccaaaa gcagtttgta acctcaaaac agttagcaaa ccttgcatct gacctgcatt 000800 000801 ttaccaatag tctttagggc tgtttttatt tcttaatgat taaagtcacg tgaactgaaa ggtaccacag cttttaactt 000880 000881 ccctttaaaa aatattagat ccaagtgctt gtctttcttt agactaaatt agttagaact ctttttccag gcatcacaca 000960 000961 caGTACAGGC AAAAGAGAAC CCAGTCGctg ggtgggaacc tttaagagac agggctaaga aaacatggag GTATCAAATC 001040 001041 TGAGAGGGCT GTTCCCCTCA ggcagggttg ctaaacaaag ccttgccaag caattaccag ccatgccccc agggtgtaaa 001120 001121 gcaagatgga agcttgcaac ataaaccatg cagacaagca aagcacacca gattgaccac agcccaagac tagccccaca 001200 001201 aatccttttt cacaattaaa actttacaga aaatacaaac agttgtagtt gcagggagcc tggactagta aagtgtcttc 001280 001281 taaaagaaaa aaaaacttta aaggttaact ttttgaccag gtagataagg ggaaagaaaa aaaaacagtt taaaaatgcc 001360 001361 tggggaa |
Predicted Small Protein
Name | NONHSAT081858_smProtein_50:160 |
Length | 37 |
Molecular weight | 4215.8275 |
Aromaticity | 0.194444444444 |
Instability index | 61.4666666667 |
Isoelectric point | 7.79913330078 |
Runs | 5 |
Runs residual | 0.0415695415695 |
Runs probability | 0.0385090973327 |
Amino acid sequence | MPFSCLSLLSSWDYRYPPPRLANFLYVFSSDRVSPC |
Secondary structure | LLLHHHLLLLLLLLLLLLLLLLLEEEEELLLLLLLL |
PRMN | - |
PiMo | - |