NONHSAT081951

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT081951

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

784 nt

Genomic location

chr21-:37504730..37509532

Exon number

2

Exons

37504730..37505372,37509392..37509532

Genome context

Sequence
000001 caaagtgctg ggattacagg cgtgagccat cgcacctggc cTgagtttgc atttctaggt tcccagatga tgtgacagct 000080
000081 actggtctcc agccacacct tgagaacACT TGGCTTTGAC TACCActtct taaacttaaa gGAAAACTAG ACAATCCACC 000160
000161 AGCCCAGGAG GGGACAAGCA GGCTTATTCC TCCTCCTCGT CATCTCTGGC TCCAGCCCCA CCCTGGCCCT TGCTGGCATT 000240
000241 CTTCCTCTTC ACGTGGCTGG GGTTGGCCAC CCCAATAGGG AAGCAGAGGG AGAAGTCAAT GTGCTTCTGG GAATCCAGGC 000320
000321 GGACAGTGAA GAACAGGATA TTTACCACCT GCTCACGGAC ACGGATATGA CACTGTTGAA TCAGCACATG AGCGTGGCGG 000400
000401 ATGGACTTAG CCAAGCCAAG CTTGAAGACC TGGGTCTGTA GGAATCTCTA AGAAATCATT GATCTTCAGG CCCAGGATGT 000480
000481 AATCCAGCTT CATCTTGCCC TCATCCAGCA CCCCAGTGCG GACCAGCCAC TGCAGCAGGG CAATGCCTTC GAACAGACGC 000560
000561 CGTGGGTCCT TCTCATCAAG CGTCAGCAGC TCCCGGGCGG CCTTATGGAT CTTGACCAGG GTAAATTTGA CCCTCCAGAC 000640
000641 CTCACATTTG TTCTGGAGCC CATACTCACC AATCAGCTTT AGCTTTTGGT CGAGATGAGG TTTCTCGAAG GGTCTCTGCA 000720
000721 GGGTCACATA AGTTTGGCAA CAAACCCAGC TCTGGGCCGC TGGCATGTTG GCTCCACTTG CCCG
[back to top]

Predicted Small Protein

Name NONHSAT081951_smProtein_542:697
Length 52
Molecular weight 5893.6091
Aromaticity 0.156862745098
Instability index 97.6960784314
Isoelectric point 12.3026733398
Runs 7
Runs residual 0.0169869928169
Runs probability 0.0433795139678
Amino acid sequence MPSNRRRGSFSSSVSSSRAALWILTRVNLTLQTSHLFWSPYSPISFSFWSR
Secondary structure LLLLLLLLLLLLLLLHHHHHHHHHHHHHHLLLLLEEEELLLLLLEEEEEEL
PRMN -
PiMo -