NONHSAT082063
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT082063 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
548 nt |
Genomic location |
chr21-:39187749..39188289 |
Exon number |
1 |
Exons |
39187749..39188289 |
Genome context |
|
Sequence |
000001 CCTGTATTCA CCGAGACACC CTGCCCCTCT ACTGTCTGCT TCAGAAGATG CACTCTTAGC GCTTGTAGCA GTCGCGTCAC 000080
000081 TGCCTGCCGT GTCATGCGCA GGGACGTACA TCTGGCCTCG GTGAACACCT GAAATGTCCT GGGTACACTC ATGTTTATTC 000160 000161 ACATATGGGG GCTAAAGCCA AGGGCTCAAA GCTTTTATCA GCCTCCCAAA GGGAAACAGC TGTAGAAAAC TGTGAGATCC 000240 000241 CTGCTCCTTC GAGTCTGAGC CTTCATCATA CTCACCTGAC ATACTCAGAG GGGTTCTCTC TGCTCCACCA GAGCTGTTCC 000320 000321 ATAGACCACC TTGTCTAAGG CCAAGTGGAC TGGATTAGAT GATCTCCCTG GAGCACCAAG TTTTCAGGAC TTCCGTGGAG 000400 000401 AACCAAGTCC CCAGAACCCC ACTATGGGGG CTCAGCCCTG CTACCTGCCC CGAGTCACTT GTGGGACTGA CACTGACAAA 000480 000481 GTCTGGTGAT TACACTGCAC AGAGCCATCA CCACTCCAAT GGTCACACCC ATTCTTCTCC CGTCACTT |
Predicted Small Protein
Name | NONHSAT082063_smProtein_164:337 |
Length | 58 |
Molecular weight | 6118.8441 |
Aromaticity | 0.0350877192982 |
Instability index | 40.1035087719 |
Isoelectric point | 6.48150634766 |
Runs | 9 |
Runs residual | 0.00394736842105 |
Runs probability | 0.0451922510745 |
Amino acid sequence | MGAKAKGSKLLSASQRETAVENCEIPAPSSLSLHHTHLTYSEGFSLLHQSCSIDHLV |
Secondary structure | LLLLLLLLEELLHHHHHHHHHLLLLLLLLLLLLLLLLLLHHHLLLHHHLLLLLLLLL |
PRMN | - |
PiMo | - |