NONHSAT082072
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT082072 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
812 nt |
Genomic location |
chr21+:39493545..39528605 |
Exon number |
4 |
Exons |
39493545..39493695,39494406..39494762,39526527..39526623,39528398..39528605 |
Genome context |
|
Sequence |
000001 TAGCGCGCAG GGAAGGCTGG TCACCCCACC CTAATCTTGT TATGCAAATA GGCTTCCCAC TTGGCAGGGG CCGTCTTGTC 000080
000081 CACTCGTTTC TGTAAACATG GGTGGCAAAA AGAGAAGATG GAGCTGCCAT TTAGAACATG CCTAATCCCA GCTTCATCTT 000160 000161 GCTGAGCAAA AATGAAGGAG CCTGGACCCA ACTTTGTTAC TGTGAGAAAG GGTCTTCATT CATTCAAGAT GGCATTTGTT 000240 000241 AAGCACCTAC TGTGAGTAGA TGATCTCCTG TCAAAGACAG TTAACAAATC CTCGGAATAT TGCTTCATGT ACAGTTATTG 000320 000321 GAGATGAGTA ACTTACATTC TCTTAATTGT AATGGTTCCT TGGAAAGTCA TCGTGGAAAA TGAAGGCTGG CTCATACATT 000400 000401 TTCCCAGACA GGAATTTGGC TGCCAACAGG GAATTCTAAA CAACTAAAAA CTCCAGATGA TGAATGCACA ACATAATGAT 000480 000481 GGTTAAATTA AAAAAAAAAA AGAGCACGGC TGGAGTGCAG TGGTTCAATC ACGGATCACT GCAGCCTCCA CCTCCCAGTT 000560 000561 CAAGAAATTC TCATGTCTCA GCCTCCTGAG CAGCTAGGAT TACAGACAAA CCTTGGAAAT CAAGAAAGTT CTGGAATGAT 000640 000641 GAAGCTGTTC ATGCCAAGAC CGAAAGTGCT GGCCCAGTAT GAGTCCATTC AGTTCATGCC GTGACAATTT TCTTGGAACT 000720 000721 CCTTTTTATT GTTAGTTCTC ACTTGTTTCC ATATTTAGTG AATGTACATT TAATTGCAAA GCTGTCATTA ATAAAAATTC 000800 000801 TTATAGTACC TC |
Predicted Small Protein
Name | NONHSAT082072_smProtein_572:703 |
Length | 44 |
Molecular weight | 4883.6663 |
Aromaticity | 0.0697674418605 |
Instability index | 73.5023255814 |
Isoelectric point | 5.98577880859 |
Runs | 8 |
Runs residual | 0.0287431408414 |
Runs probability | 0.0382882882884 |
Amino acid sequence | MSQPPEQLGLQTNLGNQESSGMMKLFMPRPKVLAQYESIQFMP |
Secondary structure | LLLLHHHLLLLLLLLLLLLHHHHHEELLLHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |