NONHSAT082122
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT082122 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
887 nt |
Genomic location |
chr21-:40110949..40140898 |
Exon number |
6 |
Exons |
40110949..40111253,40112240..40112338,40112808..40112992,40113245..40113296,40118223..40118342,40140771..40140898 |
Genome context |
|
Sequence |
000001 AGGATGGTTT CTGGATTTGT TGCGTGAGAC GTGACCTACC CTCCAATGTC TGAAGTCATC TCTTGCCTGC CTGGAAGGCC 000080
000081 TGCTGTATGT TTCGGGCATT ACTGTTTATC CTCACGTCAT AGTTTTACAG GGTCTCATTC TGTCTCCCAG GCTGGAGTGC 000160 000161 AATGGCACAA TCATGGCTCA CTGCAGCTTC AACCTCCTGG GCTCAAGCAA TCCTCCCACC TCAGCCTCCA GAGCAACTGG 000240 000241 GACTACAGGG ACTTTAAGAA GCTGCTGAAG AACCCAAGAG GAAGGTGGGA GCTGTTGATG GTGTGGAATT AGAGGCCTGA 000320 000321 TGGAGTGGAG AGCTTTCCTC CTCATCACCT GGGTCAGGAC CATGGAGCTC CTTGAGCCTT GAGATTCCAG GCCCAGGAGC 000400 000401 ACATCATCAT TGTGCTTCTT GGGGCCCAGG CGCATCTCCT AAGAACTTGT TCTTAGACAT GTTGTGCTCA AACTTGTGGC 000480 000481 ATCATAGCAG TAATAGTTTA CAATATACCT ACAGTTTCCT GGGCAGATCA TCGTGTGCAG ACCGGCTGCA GAGAGAAGGG 000560 000561 AACTGTTTCA CTTTCATCTT CCTGGGCCAT TTCCAGATAT GAATTGCAGA GACATATTTC AATATATCCT CACCCAAATA 000640 000641 TGCTTTAGAA GTACATTTCT TTTAATGTAA TAAGATTTAT GTCCTTTGTG TTTGTTTAGA GGGTAAATCT GGATTTGTAT 000720 000721 TTTTAGAAGT TACTTTCACC AAAGAAATTC GAAAGAAATA GTGTTTCAGA AAAATCAAAA CAAGCCATAG AAATCTAATA 000800 000801 TGTTTCAGAT ACTATATTGG GCTGCATGAA GACTAAATCC ATAATATGTA TGAATAATGT ATTCTAAAGT AAATATCATA 000880 000881 TTTTGTC |
Predicted Small Protein
Name | NONHSAT082122_smProtein_458:601 |
Length | 48 |
Molecular weight | 5517.1786 |
Aromaticity | 0.170212765957 |
Instability index | 49.3957446809 |
Isoelectric point | 7.78912353516 |
Runs | 9 |
Runs residual | 0.0252127659574 |
Runs probability | 0.0306581090895 |
Amino acid sequence | MLCSNLWHHSSNSLQYTYSFLGRSSCADRLQREGNCFTFIFLGHFQI |
Secondary structure | LLLLLLLLLLLLLHHHHHHHHLLLHHHHHHHHLLLLEEEEEELEEEL |
PRMN | - |
PiMo | - |