NONHSAT082126
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT082126 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
969 nt |
Genomic location |
chr21+:40229573..40230749 |
Exon number |
3 |
Exons |
40229573..40229609,40229697..40229879,40230001..40230749 |
Genome context |
|
Sequence |
000001 AGCCCCGGGG GTCCCTGGGC ATCCCTGGGA GGTCCTGCAG GTCCATGGAG AAGGTGGAAC ACTGGACTAA AGAGACAGGC 000080
000081 TGAGGAAGCC CTCAAGTCAC CCCTGATGGA GGCCAGACCT TGAATGTTAC AATCCCTCTG CTTATCGACC CTTAATAAAA 000160 000161 ATCTGAGCAG GTCTTCTCTG CAGGACACAG GAGGCTTTCT GGAAAAAAAA ACATGGAAAA AAAGTCCGGA AGTGCTCGAC 000240 000241 CAAGAGATCG CGAGATGGGA GCAGAGAGTA CAGGAAAGGA AGGAGGAGAA AGAAAGGCTG GAAACCTTTG AATGCACAAA 000320 000321 AAAAACAGGT CATGAAAGAT ACCACGAGCC AACTAAAATC TCTGGCTGAA AATGTGCTGG ACACCATGCA GTTGGAAGAT 000400 000401 TTCACTAGGG ACCGCAGTGA TGAGGGGAAC TTGGAAGCAG AGCTAAAGAG GAAAGCAGAA AATGAAGAAA CCACCCCCTT 000480 000481 AAAAATTAAG TAAATTTTTT TAAAGTTATG TGCATACATT CTGTATATAC AGAAAAGATA TCTAAATTGT ATGCACGCAG 000560 000561 AAGGAGCATT GCCCCCACAA GGAACAGTTC ATGCTAAATG GTGCAGATGA AGAGACTTTG ACAAAGGAAG TTTCCTGAGC 000640 000641 TGTGGGCAGG GATGAGAGCT CAGACAAATG ATGGGAAGCC TCCCAGATGC CAAGGTTTCC CACCCCCAGG TTTCAAGGGA 000720 000721 GGAGAGAGGA AGTGATGTCA TCTGAGCCCA GTGAGGCCCT GTCAAGGGAC CAGGGAAAAC TGCCCCCACT TTTTGCTCCC 000800 000801 ATCCTCTCAT TGACTGCAGG TGCACAGGCA GCTGCCTGAA AGAGGGCCTG CGAAGTGCAA GCCAGAGGAG TTGGCCTCCA 000880 000881 TGGCACAGAG CAGGCAGAAA ACAAATTTGG AGAATGACCA GCACTCTTGG GTTTATTTGA CTGAAAGTGC TTGTTTTATT 000960 000961 GCATTCACT |
Predicted Small Protein
Name | NONHSAT082126_smProtein_686:838 |
Length | 51 |
Molecular weight | 5411.137 |
Aromaticity | 0.06 |
Instability index | 79.614 |
Isoelectric point | 8.49163818359 |
Runs | 9 |
Runs residual | 0.0153216374269 |
Runs probability | 0.0305795992071 |
Amino acid sequence | MPRFPTPRFQGRREEVMSSEPSEALSRDQGKLPPLFAPILSLTAGAQAAA |
Secondary structure | LLLLLLLLLLLLLEEELLLLLHHHHLLLLLLLLLLLLHHHLLLHHHHLLL |
PRMN | - |
PiMo | - |