NONHSAT082151
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT082151 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
977 nt |
Genomic location |
chr21-:40543056..40544032 |
Exon number |
1 |
Exons |
40543056..40544032 |
Genome context |
|
Sequence |
000001 ATGGACACTG GTATGATTGA AATTGGATTA AATGTCATTC TCACCACCTG GCTACTTATG CATGGAAAGG AAGTTGGCAG 000080
000081 TATCATCAGA AAGAGGAGAA TCAGTTAAGA TGCATGAGGA GAGTGGTGCA TGTATCAGCA TCTCAGAAGG GAGTTGTTCT 000160 000161 GAGAGAATTA TCATCTTGGC TGGACCCACT AGCGCCATCT TCAAAGCAAG ATTGGAAGAG GATATCAGTA GCTCTGTGAC 000240 000241 CACTAGCACA GCTGCCAGTG GACCCCCTGG TCACCCTGAT GCTGGTGGTC CCTGCTAGTC ACTGTGGCTC ATTGGAAAAG 000320 000321 GTGGTTGCAA GATCAAGGCA ATACGAGAGA GTACAGGGCT CAGGTCCAGG TGGCAGGGGA TATGCTCCCC AACGCTGCTG 000400 000401 ACTGAGCCAT CACTATCGCT GGGATTCCGC AGTCCATCAT TGAGTGTGTT GGACAGGTCT GTGTGGTGTT GGAGTCTTCC 000480 000481 CCCAAACGCA TGGCCATCCC ATACTGGTCC AAGCTGTCCA ATTCTCCGGT GATCTTTGCA GGTGATcagg acaggtacag 000560 000561 cacaggcagc gacagtgtga gcttgctttc tccacaccac ttcgtccatg tgcctcaact gtgacctgga gggaccactt 000640 000641 ctagagttga CCAAGCTGCA CCAGTTGACA ATGCAACAAT CTAGTTTTCC TACAGTAGAT AGCAACGCTG GGGTTCAGTG 000720 000721 CAGGTTTGGA TGCATCTGCT CAGACCACTT CTCATAAACA CCATTCCAAA TGATACTGGC TGCATAATCA GGTGTCAAGG 000800 000801 CACCAGAATA AATGAGATCT ATCAGATGTC TGCAGCGTAG ATCAAAATTG TGAACCCAGT GGAAGGATCT ATTGATAGGC 000880 000881 AGGTTACCAT CACTGGATCT GCTGCCAGCA TTAGCCTGGC TCAATGGCTA ATCAATGTCC GGCTCACCTT AGGATGAGTG 000960 000961 GCATGGGGAA CAGCTAG |
Predicted Small Protein
Name | NONHSAT082151_smProtein_113:238 |
Length | 42 |
Molecular weight | 4631.3654 |
Aromaticity | 0.0487804878049 |
Instability index | 69.4268292683 |
Isoelectric point | 10.9313354492 |
Runs | 9 |
Runs residual | 0.0435433188688 |
Runs probability | 0.0480186068422 |
Amino acid sequence | MRRVVHVSASQKGVVLRELSSWLDPLAPSSKQDWKRISVAL |
Secondary structure | LEEEEEEELLLLLEEEEHHHLLLLLLLLLLHHHHHHHHEEL |
PRMN | - |
PiMo | - |