NONHSAT082171
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT082171 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
745 nt |
Genomic location |
chr21-:40714835..40720523 |
Exon number |
7 |
Exons |
40714835..40715085,40717072..40717200,40717756..40717884,40719305..40719409,40720218..40720265,40720348..40720377,40720471..40720523 |
Genome context |
|
Sequence |
000001 GTGCGTCTCC GTCTCCGCAG GTCAGCTCCG CCGAAGGCGC CGCCAAGGAA GAGCCCAAGA GGAGATCGGC GCGGTTGTCA 000080
000081 GCTAAACCTC CTGCAAAAGT GGAAGCGAAG CCGAAAAAGG CAGCAGCGAA GTGTAGGTAG AAGTTTAGCA CTGCAGTCAT 000160 000161 CAGAAGAGGC AAGATTAATT TCCTTGACAT TGAGGAGTTG TTGGATAATT ACTAAATTTG TCCTTGTTAA ATAAAGATTC 000240 000241 TTCAAACACC TAAATGAAAG TGATAAATTC AAAACTGATC CTTTTAGTTC CTCATTATAT GATATGAAGG GATTAACTGT 000320 000321 AGCAGGATAG TCAACCTGAC CGTACGGCAT GGTGCTTTTT TTCAGGATAA ATCTTCAGAC AAAAAAGTGC AAACAAAAGG 000400 000401 GAAAAGGGGA GCAAAGGGAA AACAGGCCGA AGTGGCTAAC CAAGAAACTA AAGAAGACTT ACCTGCGGAA AACGGGGAAA 000480 000481 CGAAGACTGA GGAGAGTCCA GCCTCTGATG AAGCAGGAGA GAAAGAAGCC AAGTCTGATT AATAACCATA TACCATGTCT 000560 000561 TATCAGTGGT CCCTGTCTCC CTTCTTGTAC AATCCAGAGG AATATTTTTA TCAACTATTT TGTAAATGCA AGTTTTTTAG 000640 000641 TAGCTCTAGA AACATTTTTA AGAAGGAGGG AATCCCACCT CATCCCATTT TTTAAGTGTA AATGCTTTTT TTTAAGAGGT 000720 000721 GAAATCATTT GCTGGTTGTT TATTT |
Predicted Small Protein
Name | NONHSAT082171_smProtein_554:694 |
Length | 47 |
Molecular weight | 5646.4729 |
Aromaticity | 0.260869565217 |
Instability index | 73.0176086957 |
Isoelectric point | 8.68499755859 |
Runs | 9 |
Runs residual | 0.0342908902692 |
Runs probability | 0.0425621700131 |
Amino acid sequence | MSYQWSLSPFLYNPEEYFYQLFCKCKFFSSSRNIFKKEGIPPHPIF |
Secondary structure | LLEEEELLLLLLLLHHHHHHHHHHLEEEELLHHHHHHLLLLLLLLL |
PRMN | - |
PiMo | - |