NONHSAT082353
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT082353 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
2280 nt |
Genomic location |
chr21-:44263801..44266080 |
Exon number |
1 |
Exons |
44263801..44266080 |
Genome context |
|
Sequence |
000001 TGTAGAGATG GTGTCTTGCT CTGCTGCCCA GGCTGGTCTC GAACTTCTGG CCTCAAGCAG TCCTCCTGCC TTAGTTTCCC 000080
000081 AAAGCACTGG GATTACAGGT GTGAGCCACT GCCCCCGGCC AGCACCCGTC TTCTGGAACA TTTGTAAGCA TTTCTGTTGG 000160 000161 GTGTGTACTT GCGCGTGGAA TTGCTGGCTC TCAGTTATGC ACATTTCTTA GAAGATCCTG CCAGTCCTTC ATCCCAGACC 000240 000241 CCGACCCCAG CGTGGAAAAC GCAGTGCATC CTCAACGCCT AGTGTTTGCG GCTGTGGCGG CTCATGATCG ACTTGGAAGG 000320 000321 CCCACAGTGT GTGGTGTGGA GTTTTGCAGG GAGCCAGTGA CACTGCCCAC CTTCGATCCA GACCTAACCT TGATCCTGTT 000400 000401 CTCTGAGGCC ACCTTACCAA AACCTTGACT TACCCGTCTT AGATCACTTA CCCTGGGGGA AATGTGCCGC AAGCTCACGA 000480 000481 GGGCACTCAG CCAGCCTACA AAGGTTACCA TGGCAGAGAA CTGAGGCCTC CTGCCAGCAG CCAGCAGCAG CTGACCAGCC 000560 000561 GCGAGGGCCC CTCCGGGAAG GAGAGCTTTC TGTGTTTCTT CCTGTACCCC ATATATGTTG ACGTGATACG TTTTACTTTC 000640 000641 TGATTTCCCT TGTGAGATCT TTGGTCTGTG GGTTATTTGG AAGTATGGTT TAATTTCCAA ACATTTAGGG TTTTCCTCCA 000720 000721 GATTTTGTTG TTGTTTCTGG TTTCTGGTTT TAATTCCACT GTGGTCTCAG AATATACTTT GCTGACTTCC CTCTCTTTAG 000800 000801 ATTTGTTGAG CCCTGTTTTG TGCTTCATAG TGGGAGGGTG ATTGTATGTG CACGTGCAGA TATGTGTGGC CCCCACACGG 000880 000881 TATCTCCAGC TATCCGTGTC TTGCCTCTCC GTGCCCAGTG CACCCTTCTC AGCCCTGCCG TGTGACCCTG GGCTGGGCCC 000960 000961 TCCCTGTACC CTCCTTTGCA GGTTGGCACA GTGTTTGGCT CTGTCACTGG AAGGAGCTGG AGGGACTCCA CAGGAGGGAG 001040 001041 GGGCCTGCCC TCCTGGTTCC AGTGTGCTTG CTTTTCCTGG CTTCCGTGGT GTGTGCCTGC CAGCCTCATG GTGGGGGCGG 001120 001121 GGGCTCTCAG TGACAGTCTG CAGGAGTTTA GCAACACCCA GGTTCATTCA CCACGGTGGG AAGGATTCCT GCTAAGCTTC 001200 001201 CTTGCCTCTG TCCAGCTCCC AGGGCGTCTG CCTCCCTCCT GCCCCAGGGA GAGCTTCTGG GTGAGTCTCG CTGGCACTCC 001280 001281 TGCCCCGGGC TTCCTGCTCT CAGGCCTTGG CCTGCTGCAC CTTGGCCAAC TGCACCACCC GGCACATCAT AGCCCCACTC 001360 001361 AGGTCAGAGC TGCGTCTCAG CCGACGTGGG GTTCCGAGGT TCTCACCAAG ATCCAGACTC AACGCTTGTG GGTTTGTTGT 001440 001441 CTCAGTCCTG GCGGTGGAGG TTCTCCCGAG GCCTCAGCGC CTCCGTTCTC GGAAGTCTCT TTACATGTTA GTGGAACCCT 001520 001521 CTGTTCCTGT TGAATCATTC TTCGTGTTAA ATGTTTCTAT CTCTTGACTG ATACATGATA GTCATCATGT ATGTATTCTG 001600 001601 CGGCTGCTTT TGTTTTTTTC TCTTTATCCC TGGTTTTCTG TAATTTGATA AGCTTTAGGG TATGTGTGTG TGTTTTGGGG 001680 001681 GTTTGTCAAG ATTTGTAGGC TTTGTCATTT TTATGCAATT TGGAAATATT CTAGCTATTC GGTCTCTTCC CCTGCCTCCT 001760 001761 GCAGTCCCAG GTACTCGAAT GGGCTGCTTG CTGTGGACTC ATGGGTCCGT GAGTCTGCTC ATCTTCTTCA GTTTGCGTTT 001840 001841 CATTTTTGGT AGATTCTGTT TCCACGTCTT CAAGCCCACT GATCTTTTAA GCTGCTGTTA AGCTATGGCC ATTTTCTGTA 001920 001921 TGAGCCATTG TGTTTTTTCA TCTCTATAAA TTTGGTTTTG GTATTTAAAA AAATGTCTTC CAGCTAGGCT GGCGGCTCAC 002000 002001 ACCTGTGATC CCAACACTTT GGGAAGTTGA GGCAGGGGGA TTGCTTGAGC CCAGGAGTTT GAGACTAGCC TGGGCAATAC 002080 002081 AGTGAGACCT CATCTTTAAA AATAATTAAA AAGGTCAGGT GCGGTGGCTC ACGCCTGTAA TCCCAGCATT TTGGGAGGAC 002160 002161 AGTGGATCAC AAGGTTAGGA GTTTGAGACC AGCTTGGCCA ATATGGTGAA ACCCTGTCTC TACTAAAAAT ATAAAAAATT 002240 002241 AGCTGGGCAC ATGCCTGTTG TCCCAGTTAT TTGAGAGGCT |
Predicted Small Protein
Name | NONHSAT082353_smProtein_845:1132 |
Length | 96 |
Molecular weight | 10287.9806 |
Aromaticity | 0.0947368421053 |
Instability index | 71.2873684211 |
Isoelectric point | 8.13067626953 |
Runs | 14 |
Runs residual | 0.0183174471612 |
Runs probability | 0.0366669190199 |
Amino acid sequence | MCTCRYVWPPHGISSYPCLASPCPVHPSQPCRVTLGWALPVPSFAGWHSVWLCHWKELEG LHRREGPALLVPVCLLFLASVVCACQPHGGGGGSQ |
Secondary structure | LLEEEEEELLLLLLLLLLLLLLLLLLLLLLLEEEELLLLLLLLLLLLLLLLLEEHHHHHL LLLLLLLEEEELHHHHHHLLEEEEELLLLLLLLLL |
PRMN | - |
PiMo | - |