NONHSAT082516
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT082516 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
821 nt |
Genomic location |
chr21+:45838020..45841433 |
Exon number |
3 |
Exons |
45838020..45838050,45839915..45840003,45840733..45841433 |
Genome context |
|
Sequence |
000001 TGTCCTGGCC ACCCGGGTGC AGAGGGGGTG GATGTGAGGA CCTTAATGAA CTAGCTGATG TCAAAGCCCC TTCTAGCTCC 000080
000081 CATTCTGAGT GAACTAGATA CACGTGTCCT GTTTGCTTGA CAACCCTTTT GCAGAGGGAG GTATTTTTCC TTCCACTTTT 000160 000161 ACCCATGAGG AAGTGGAGGC CCAGGAAAGT GAGAGAGGTG GCTCAGCTTC CACCACTGGC CAGCGGTGTG GCCTGGAATG 000240 000241 CAGGCCCCAG CAACTTTGCA GCCTCCTGCC TTAAGGGAGT GGGCTGGACC CCAAATGAAT CAGTCCCAGG CCGGGCGCGG 000320 000321 TGGCTCACGC CTGTAATCTC AGCACTTTGG GAGGCCAAGG TGGGTGGATC ACAAGGTTAG GAGATCAAGA CTATCCTGGC 000400 000401 TAACATGGTG AAACCTCATC TCTACTAAAA ATACAAAAAT TAGCCGGGTG TGGTGGCGTG CGCTTGTAAT CCCAGCTACT 000480 000481 TGGGAGGCTG AGGCAGGAGA ATCGCTTGAA CCCAGGAGGC GGAGGTTGCA GTGAGCTGAG ATCGCGCTGC TGCACTCCAG 000560 000561 CCTGGGCGAC AGAGCAAGAC TCCACCTAAA AAAAAAAAAA ATTTAGTCCC AAATGCCTCT CAGCTCCTGC CCTATCCCAG 000640 000641 ACATCTTAAA GCTCAGAGCT GGTCTGCTGC CTATTTCCCA GCCTAGGTGC TCAGTGGAAG TTGGGCGCCT CCAGTTATTT 000720 000721 TCTGAGGTTG AAAAAGCTTA ACTAAAATAT AACTTTGCAG GCCAGGCACA GTGGCTCATG CTTGTAATCC CAACATTTTG 000800 000801 GGAGGCTGAG GTGGGAGGAT T |
Predicted Small Protein
Name | NONHSAT082516_smProtein_164:379 |
Length | 72 |
Molecular weight | 7639.7412 |
Aromaticity | 0.0845070422535 |
Instability index | 43.6873239437 |
Isoelectric point | 11.3814086914 |
Runs | 9 |
Runs residual | 0.0217939214233 |
Runs probability | 0.048597617225 |
Amino acid sequence | MRKWRPRKVREVAQLPPLASGVAWNAGPSNFAASCLKGVGWTPNESVPGRARWLTPVISA LWEAKVGGSQG |
Secondary structure | LLLLLLHHHHHHLLLLLLLLLLLLLLLLLHHHHHHHLLLLLLLLLLLLLLEEELLHHHHH HHHHHLLLLLL |
PRMN | - |
PiMo | - |