NONHSAT082530
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT082530 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1113 nt |
Genomic location |
chr21-:45889812..45892399 |
Exon number |
3 |
Exons |
45889812..45890247,45890553..45890810,45891981..45892399 |
Genome context |
|
Sequence |
000001 aaTCTAGTGG TCGACATTTG AAAAACCCAC CACCTAATAA AAATTATCAA CCACTTCTTC ACTGACTTCC CAGTGCCATC 000080
000081 AACTATCTCT GCATGATGGA ATTTCGGCTC ACTTTTAGGG GTCTGCCGAG CCCTAGAAAT CATTACAGGA CTTTTTCTAG 000160 000161 CTATACATTA TACACCAGAT ACAGTAACTG CATTTTCCTC TGTTGCACAT ATCTGCTGAG ATGTAAATTA TGGCTGAGTT 000240 000241 ATCTGACATT GACATCAATA TTCTCATCTG CCTATTTATA TATGTAGGAA GAGGCTTATC CCAGGGGTCC TACACTTTTC 000320 000321 TGGAAACCGG AAACATTGAC ATCATTTCTG CTATTGGCAG TGATAGCAAC AGCATGTATA GGCTACGCCC TACCATGAAG 000400 000401 ACAAATGTCT TTTTGAGGAA CAGTGATCAC AACCCTGTGA TCAGCTATTC CATGCACTGG CACCTATCTA GTGGAGTCAG 000480 000481 GTGGAGACAG ATCTTCAGTT GACAAAGCCA CCCTGACACG ATTCTTCACT TTTCACTTCA CTTTACCCTT CACGTCGCTG 000560 000561 CCTTGGTAGC TGTCCACCTT CTCTCCCTTC AGGTAACGGG ATCCAACAAC CCATCAGGAA TTTCATCAGA TGTGGCACAA 000640 000641 TCCCATTTCA CCCATACTAC ACAATTAAAA ACATTTTATT TTAGGCTTGG TTCTCCTCCC ATGATGATTA CCTGTTGCAG 000720 000721 TCTTGTTTTA ACCTGACCTA CTAGGAGACC TAGATAATTA TAGCCCAGCA AATCCCCTAA CGCACCACCT CACATCAAAC 000800 000801 CAGAATGACA CATCAACCCT ATGCTCCATT CCCAATACCT CAGGAGGAAT TCTGGCCCCT GTCTTCTCTG TTCTCATCCT 000880 000881 GGCCATTGTC CCAATACTTC ACCTGTCTAA ACAATGGAGC ATCCATAATA TCCCACCATT CAGCTAATGT CCATTTGAAT 000960 000961 TCTAGGAGCA GAGCTTCTCA CACATACGTG GCTCGGGGGT CAGCCCATTG AACAGCCTTT CATTATGGTT GGTCAAGAAG 001040 001041 CATCCACTAT GTATTTCCCT CTCATTCTCC TTTTAATACC ACTCACTAGC TGAATCGAAG ACAAGCTACT GAA |
Predicted Small Protein
Name | NONHSAT082530_smProtein_92:286 |
Length | 65 |
Molecular weight | 7809.1385 |
Aromaticity | 0.21875 |
Instability index | 50.7890625 |
Isoelectric point | 9.46038818359 |
Runs | 9 |
Runs residual | 0.00796875 |
Runs probability | 0.0336905532984 |
Amino acid sequence | MMEFRLTFRGLPSPRNHYRTFSSYTLYTRYSNCIFLCCTYLLRCKLWLSYLTLTSIFSSA YLYM |
Secondary structure | LEEEEELLLLLLLLLLLLLLLLEEEEEEELLLEEEHHHHHHHHHHHHHHHHHHHHHHHHH EEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLL LLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTToooo oooo |