NONHSAT082910
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT082910 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1307 nt |
Genomic location |
chr21+:46424359..46430667 |
Exon number |
2 |
Exons |
46424359..46425173,46430176..46430667 |
Genome context |
|
Sequence |
000001 CTCGGAATTT ACCTCTTGAA AGTCCAGGCA GTTCAGCGGC ATCCGGTCCA CCCCCACTGC GGTGCAGTGC CAGGGTGAGC 000080
000081 CAGCCACCCC CGGCGGGAGA AACACCATCC CCACAGCCGG CGCTCCTGTG CCCCCTCCTC CCAGCCCCGG GCAGGCCTCG 000160 000161 CCTCTGTGCG TTTCCCATGG ATGAGGTCAT AGAGCGCGTG GCCTTCCGTG CCTGCCTCTT CCGGGCAGCA GCATGGTGGG 000240 000241 TGTTTCTGAG GCTCCTCCGT GTCGCTCCAC CCGTCAGCAC TTCATGCCTC TCGGGGCTGG GCCACATTTC GTTGCAGGGA 000320 000321 TGGGCCACGT TTTTAACCTG TCCATCAGCG GACGGACGTT TGGGCTGATT TTATCTTTTG GCTATGATGA ATAACGCGGT 000400 000401 GATCAACATT GATTCACAAG TTTTGTGCGG ACCCGTTTTC AGTTGTCCTG AGTATCAGCC CGGGCCTAGA CTTCCCGGGT 000480 000481 TATATGGTGA TACAGTTTAA ACGCATGTCC TTGCCAAGCC TCGTGTTGAA CTGTCATCCC CCGTGTTGGA GGTGGGGCCT 000560 000561 GGGGGCAGGT GTTTAGGTCA CGGGCGTGAC TCCCTCAGGA ATGGCTTGAG CCATCCCCGT GGTGAAGAGT GAGCTCTCAC 000640 000641 TCTGGGTTCC TGTGAGATCT GGTGTTTAAA CGTGTGTGGC ACCTCCCCGA CCCCGCTGCT CCCGCTTTCA CCACGTGACT 000720 000721 CGCCTGCTCC CCCTTCACCT TCCACCATGA GTAAGAGTTT CCTGAGGCCT CCCCAGAGGA AGAAGCCCTT ATGCTCCTGT 000800 000801 ACAGCCTGCA GAACTAACCT CCTGTGCAAT GCTGAATGGG ACCATTGAGA GTGCTGTCCC TGACTTGTTC CTGGCCTCAG 000880 000881 GGGAAGCACT CAGTCTTTCA CAAGTAGGTG TGATGTCAGC TGTCGGGTGT TCAGAGATGC CTTTTATCAG GTTGAAGAAG 000960 000961 TTGCTTCTAC TCCTGTTTGC CAAGAGTGTT TTGAGAATGC ATGTTGGAAT TTGTCAAATG CTTTTTCTGT GTCTATTGAG 001040 001041 ACAATCACAT TGTTCTTCTT TCAGTTTGTT AATATGGTGA CTTAAATTGA TTTTTACGTG TTCAATCCTT AAGACAATCC 001120 001121 TGATATATTG GGGAAAATTC TCCTTGGTTA TGATGTATCA TCTTTTTAAT ATGTTGTTGG GTTCAATTTA GTAAGCTTTT 001200 001201 GTTTAGGACT TCTAAAGGGG GATGCTTGTT CCTATATTCT TCTCCTGTAA TGTCTTTGGT TTTCATATCA AGATCATGCT 001280 001281 GGCCTCCTGG AAGGACTTGA GAAAAAT |
Predicted Small Protein
Name | NONHSAT082910_smProtein_176:367 |
Length | 64 |
Molecular weight | 6921.0625 |
Aromaticity | 0.111111111111 |
Instability index | 67.4650793651 |
Isoelectric point | 8.71063232422 |
Runs | 5 |
Runs residual | 0.0655976676385 |
Runs probability | 0.0570570570571 |
Amino acid sequence | MDEVIERVAFRACLFRAAAWWVFLRLLRVAPPVSTSCLSGLGHISLQGWATFLTCPSADG RLG |
Secondary structure | LHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLEEEEELLLLLL LLL |
PRMN | LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHLLLLLL LLL |
PiMo | iiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTTTTTiiiiii iii |