NONHSAT082963
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT082963 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
725 nt |
Genomic location |
chr21+:46903719..46904660 |
Exon number |
3 |
Exons |
46903719..46903843,46903999..46904118,46904181..46904660 |
Genome context |
|
Sequence |
000001 GTGGTGAGAG CACTTGGAGA GGCTGAGAGG ACATGGGCTG GGAGTGAATG CATGTGcaca tacacacaca cacctctcca 000080
000081 gcatatgtac acatgcacac acacacctct ccagcatatg tacacacaca cacacctctc cagcatatgt gcacacgcac 000160 000161 acacacctct ccagcgtatg tacacacaca cctctccagc atatgtacac gcgcacacac ctctccagca tatgtgcaca 000240 000241 cacacacata ggcacacaca tctccagcat atgtgcacac acacacctcc agcatacatg cacacacatg cacacacaca 000320 000321 tctccagcat atgtgcgcac acacatacac gcacacacac aTCTCCAGCA TGTGTGTACA CACACACACA CCTCTCCAGC 000400 000401 ATATGTGAGC ACACACACAC CTCTCCAGCA TGTGTGCACA CACATGCACG CCTCTCCAGC ATATGTGCAC ACACACACAT 000480 000481 GCACCTCTCC AGCATATGTG CACATACACA TAGCCAGCAC ATGTGCACAC AGCTCTCATG TATGTGCACG TGTATCTCTA 000560 000561 GCATACATGC ACACATGTAT CTGGTGTATA TGTGCAACAC ATGTATCTGG GGCATGTGCA CACGCATCTC TTATGTGCAC 000640 000641 ATACACACAC ATGTATCTAG GTATGTGCCC ACGTTTTTCT AGCACACATG CACACACATC TCTCTAGCAT ATGTACACAC 000720 000721 ACATG |
Predicted Small Protein
Name | NONHSAT082963_smProtein_443:706 |
Length | 88 |
Molecular weight | 9474.9015 |
Aromaticity | 0.0804597701149 |
Instability index | 66.8471264368 |
Isoelectric point | 8.13885498047 |
Runs | 13 |
Runs residual | 0.0111658456486 |
Runs probability | 0.050127050127 |
Amino acid sequence | MHASPAYVHTHTCTSPAYVHIHIASTCAHSSHVCARVSLAYMHTCIWCICATHVSGACAH ASLMCTYTHMYLGMCPRFSSTHAHTSL |
Secondary structure | LLLLLLEEELLLLLLLLEEEEEEELLLLLLLLHHHEEEHHHHHHHLHHHHHHLLLLHHHH HHHHHHHHHHHHLLLLLLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLL LLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiii iiiiiiiiiiiiiiiiiiiiiiiiiii |