NONHSAT082993

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT082993

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2077 nt

Genomic location

chr21+:47207916..47213897

Exon number

3

Exons

47207916..47208291,47209390..47209585,47212393..47213897

Genome context

Sequence
000001 GGAAGATGGG GGCACCTACA GTTGCAAGGT GGGCACCAGT TGTCAGGAGT TGACAGGAGG GCATAGCCAG GAACAGCTGG 000080
000081 TGTCTCCTTA CTGGGACATG CTGTGACCTG TAGAATCGTG TCTGACCATT TCTGGAGGAT GCAGTACTGA ATTCAAGTAA 000160
000161 CAAGGTGTCC TGTGAACCCC CCACAGTCAG ATGGGTGAGG GATGGGGAGG GTCACGCAGG GTGTGGGCGG CGTGCCTGGC 000240
000241 ATGGGTCCTG CCAAGTTCGT CAGGTAACGT GATACTTCTC CCTTGCTTTT TGGTAGATGG ACAGTGTGTC ACCCTCGGGG 000320
000321 AGCAGGTGGG CTGGCAGGAC AGGCGGCCCC AGGCCGGGAG AAGGAGACAC TCCCAGtgtt caatagggcc gtcaaggttg 000400
000401 gccttattaa gaaggtgatg ttaaaggaaa gatgagggtg tgagccatgg atgaggagca atccgggcag aggagtcccc 000480
000481 agcacgaagg ctttaaggtg gaggacaacc cggggccagt gtggccggag cagagcgagc aagggagagc atcaggggct 000560
000561 gagttccagg agACAGCACA AGTCAGTCTT CTGGTGATTG TAACAGGATG GTCACCTGAG AACAGTCATC TACTGACACC 000640
000641 CTGAACCAGA ATCTCCAGAA AAGACAGAAA TTTTGAAACA GCAGCAACAA CAGAAATTCA TGATGTGCTA GGAGACAGGG 000720
000721 ATGACTGCAG TCAGAGGACC AGATGTCTTG ATTGATTATT AAGAGAGAGA AACAGGCGAT GTTTGTGGAA TCACATCACC 000800
000801 ACAGAAGACA TGCAGACAGG CCTAATGCAG AGAAGAGTGG AAGTTAGGAC GCTCAGCGCA GATTAATGGA CTCAGGGAGT 000880
000881 TGGAGAGGGC TGGCTGGCAG CACTTACTCA GAGGAGCAGA GCCAGGTATC CCCCTCAAAC CCCCCGGCTT TGGGCCCAGG 000960
000961 CAGTCAGAAG TTGTGTCGGG GCCAGCCACC AACTCCAGTG AGGGACAGGG AGCCACTTCC AGGAGATGAA ACATTGTCAC 001040
001041 ATGCAGTCCA AAGACACCCC TCCTTCTCCC TGCTGCAACA CCCGAGGCTG ACCAAAGTAG ACAGGAACAG TATCCAGGAT 001120
001121 GAGCAAACCA AGCCTCTCTA AAGCAAAACT GCCAACAAGC TGGGAACCAC AGCACGCTGG AGGGAAACCA GCAGCAGGAG 001200
001201 AAAGCAGCAG CAAGCACAGC AGAAAGAAGA CGTGGGGCCG CCTTCCGGAC GGAGACTCGG TCAGACACAC GGCTCCTTCA 001280
001281 AAGGGAGTGC CAAAGGCCTT GAAGAGTAGA CGGTCAAAGT GGCACAGCCA GGAAAGCAGG ACTCACAGAA TGGGCAGCAT 001360
001361 GAAGAGTTGC ATAGCCACGG ACTATTGAGA ACGCAGACCC AGAACTGTTA CCGCACTCAG ACGTCAAAAA CCGAGAGCTA 001440
001441 TTCCCGAGCA CAGACCGAGG ACCAGCGAGT CCAGGACTCG CTGATGCAGA GCTCCAGGAC TGACAGGCGG GGAGAGCGAG 001520
001521 AGGAAAAGCT GAGGCCAAGC GCGATGCTGA GAAGCTCCAT ATTCTGTTTA ACAGGAGTCT GAGGACCAGG AAAGAGAGAA 001600
001601 TATTGAGGGG AAGATAATGG AGACATCCTA GAAGATCGTC TCCCCGAGCA CAGAGCGCAT CACAGGACTG ACCAGTATTG 001680
001681 AGTGGGCGCG GGGAAAACAT GGCTGCCAGG ACCTGTGAGG ACCGAGTTTC AGATACTGTG GACAGCGGAG ACTCCACAGG 001760
001761 GGCTCTGCAG GAGGAGACGG GAGGCGATAG CCCCTGCAAA GCTCTGGCTG GTgattggca tcagacttct caatgagaaa 001840
001841 ctgtactcta gatttaatta gaacagtatc ttcaaaatac tcgggaaaaa tgatttcaaa cctggaattg tagacacaga 001920
001921 cagactagaa ttcaaattga agggcaaagg aaaagtgtct tcagatagtg aaggactcag aGGTTACCAG CCTCATCCCT 002000
002001 AATACCCTGA CAAAACTAAA AAAAAGACAA CTATCTATGA AAGAAAACAA GTTTTGATTC CACAAATAAT GGAGAGG
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Predicted Small Protein

Name NONHSAT082993_smProtein_1118:1387
Length 90
Molecular weight 9781.9928
Aromaticity 0.0449438202247
Instability index 66.2831460674
Isoelectric point 10.6696166992
Runs 9
Runs residual 0.0420797532496
Runs probability 0.0321694243263
Amino acid sequence MSKPSLSKAKLPTSWEPQHAGGKPAAGESSSKHSRKKTWGRLPDGDSVRHTAPSKGVPKA
LKSRRSKWHSQESRTHRMGSMKSCIATDY
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELLLLLLLLHH
HHLLLLLLLLLLLLLEEELLLLEEEEELL
PRMN -
PiMo -