NONHSAT083025

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT083025

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

1472 nt

Genomic location

chr21-:47559330..47560952

Exon number

2

Exons

47559330..47560434,47560586..47560952

Genome context

Sequence
000001 CAGGAAGGAA ACAAGACGTG TGGTTTAGAG AACCATGAGC GGGGACAGTG AGACTGTGCT AGGCATCAGT GGTCGAAATC 000080
000081 AGTGGATTGG TTTACGCTCC CTGTGAGCCA CGTGAAGGTG GACGGGGAGT GCTGGATTGG TTTACGCTCC CTGTGAGCAA 000160
000161 TGTGAAGGCA GACGGGGAGT GCTGGATTGG TTTACGCTCC CTGTGAGCAA TGTGAAGGCT GACGGGGAGT GCTGGATTGG 000240
000241 TTTACGCTCC CTGTGAGCCA CGTGAAGGTG GACGGGGAGT GCTGGGTTGG TTTACGCTCC CTGTGAGCAA TGTGAAGGCA 000320
000321 GACGGGGAGT GCTGGATTGG TTTACACTCC CTGTGAGCCA CGTGAAGGTG GACGGGGAGG GCTGGGTTGA TTTACATTCC 000400
000401 CTGCGAACAA TGTGAAGGTG GACGAGGAGT GCTGGGTTGG TTTACACTCC CTGTGAGCCA CGCGAAGGTG GACGGGGAGT 000480
000481 GCTGGATTGG TTTACACTCC CTGTGAGCCA CGTGAAGGTG GACGGGGGAG TGCTGGGTTG GTTTACACTC CCTCTGAGCA 000560
000561 ATGCGAAGGT GGACGGGGAG GGCTGGGTTG ATTTACATTC CCTGTGAACA ATGTGAAGGT GGACGGGGAG TGCTGCATTG 000640
000641 GTTTACGCAC CCTGTGAGGC ACGTGAAGGT GGACGGGGAG TGCTGGGTTG GTGTACACTC CCTGTGAGCA ATGTGAAGGT 000720
000721 GGACGGGGAG TGCTGGATTG GTTTATGCTC CCTCTGAGCA ATGCAAAGGT CGACTTTTGA AAAACATAAG GAGATATCTG 000800
000801 TACCTTGCAC CAAATACATA AGTAATTTCC AGATGGAATA GAAAACTGTA TTTCCCCACC ACCAACACAA CCAAGCCTCA 000880
000881 CGATAAATCA CAGAAAACAA AACGGACCGG GCGGGCAGGC CTCGGCCGGA CGCAGATGAG GCCACCTAAA GCACACCCTT 000960
000961 GGCCAAGATC TGCCCAGGGA GACCATGGAC ACCGCAAGGC CTGGGTGTGA GAGAGTGTTC GTAGCGCGAG TCGCAGCTTG 001040
001041 AGGATGGCTG TCCTGCCTCC GCCTGCAACT GCTACAGACC CTTGTGCAGA GGACAGCCTG GGAGAGGGGC TGCAGCCAGG 001120
001121 AGGCCTGGTC TGGATGATGC CCCAGCCAGT CAGGGAGACA CTGGGCATTT CTGTTCCTCG ATCACTGCTG TCGGAATGGT 001200
001201 CAAAGGATCC AGATCTGGCT GGCGCCCAGG GAGCATTTGC TCTCATCCAT GGTCGAGGGT AGGGGCTGTT GATGATGACT 001280
001281 TTCTGGTGGA GAGTTGGCTG AATCTTCCAA GATGAAGTGA GCATATTCCC CACTGAGAAC CCCTTGGCCA GGGCTCTGGC 001360
001361 CACAGTCCGT GTGAGTAGGG CTCCCAGTGG GTCCTTGGAA GGTTGGTGTG TGGTCCCAGC TGTGCTCTTC CACACGGGGT 001440
001441 GGGTCCGAGG AGCCGAGTGC CTTACGGTGA CG
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Predicted Small Protein

Name NONHSAT083025_smProtein_1043:1261
Length 73
Molecular weight 7465.4792
Aromaticity 0.0416666666667
Instability index 54.2916666667
Isoelectric point 4.49957275391
Runs 8
Runs residual 0.0298053527981
Runs probability 0.0232843137255
Amino acid sequence MAVLPPPATATDPCAEDSLGEGLQPGGLVWMMPQPVRETLGISVPRSLLSEWSKDPDLAG
AQGAFALIHGRG
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLEEEELLLLLLLLLLEELLLLLLLLLLLLLLHHH
HHHHHEEEELLL
PRMN -
PiMo -