NONHSAT083181

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT083181

Source

NONCODE4.0

Same with

,

Classification

sense

Length

621 nt

Genomic location

chr22+:17565947..17578399

Exon number

2

Exons

17565947..17566119,17577952..17578399

Genome context

Sequence
000001 GCCGGGGCCG AGCCCTCCGC GACGCCAGCC GGGCCATGGG GGCCGCACGC AGCCCGCCGT CCGCTGTCCC GGGGCCCCTG 000080
000081 CTGGGGCTGC TCCTGCTGCT CCTGGGCGTG CTGGCCCCGG GTGGCGCCTC CCTGCGACTC CTGGACCACC GGGCGCTGGT 000160
000161 CTGCTCCCAG CCGGGGCTAA ACTGCACGGT CAAGAATAGT AAGTCATCTT TTTCTGTTCT TCTTCTTGTT GCCTTCTTAA 000240
000241 TCAAGTGAGA GCCTGCTGCC AACTTCTGAC AGAAGTCTTG CCATGCCACT CCAGGTTCAG GCTGTGAGCT ACAGCCATCC 000320
000321 GCAGGAGGGT TCCCGGAGAA TTGTGGATGC GTGCACCTGC GCTTCCTGTC GAGAACATTC ATTATGCAAA AGTCAGGAAA 000400
000401 GGAGAAACAG AACTGTCATT TGGATTGTGA AAGTATTCTC TGGGGAGCTG CCCTACTGTA TCTATAATAT AATTTGATTT 000480
000481 GCCACAGCTT GTCACTGTAA AGTGAGAGAC ATCTGTGCTG TTGATTTTGT TTTGTTTTAA TTCAAAGAGG CACATATTCA 000560
000561 AGTGTCTGAG CCAATTAGAG ACCCCTGACA TATAACAATA AAGCAGCTCT TACTACAACT G
[back to top]

Predicted Small Protein

Name NONHSAT083181_smProtein_35:247
Length 71
Molecular weight 7133.5781
Aromaticity 0.0285714285714
Instability index 46.3814285714
Isoelectric point 10.3208618164
Runs 11
Runs residual 0.0123055162659
Runs probability 0.058855647091
Amino acid sequence MGAARSPPSAVPGPLLGLLLLLLGVLAPGGASLRLLDHRALVCSQPGLNCTVKNSKSSFS
VLLLVAFLIK
Secondary structure LLLLLLLLLLLLLHHHHHHHHHHHHHLLLLLLHHHHHLLEEEELLLLLLEEEELLLLLHH
HHHHHHHHHL
PRMN LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLHHHHHHHH
HHHHHHHHHH
PiMo ooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiTTTTTTTT
TTTTTTTTTT