NONHSAT083426
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT083426 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1385 nt |
Genomic location |
chr22-:19833669..19842386 |
Exon number |
3 |
Exons |
19833669..19834912,19841966..19842062,19842343..19842386 |
Genome context |
|
Sequence |
000001 GCGCGGCGCT CCTAGGAGCA GGCGTTCCCG ACTCCGGCAA GAGGGTGGCG CCTGGACTCT CGCCCTCAGA GGGAGGCCCG 000080
000081 TCCCACGGTC TGTGGCTACG GATCCCAGGA CCCTCTTCGC GGGCGATTCG CGTAGCCTCA GAACTGGAAA AGCCCAAAGA 000160 000161 TCCAGCAATA AAGGAGCAAG GCAAATAAAG CTGTTACCCT GCAGGatcag tcagcatgag ccagattgtg ctgcagtaac 000240 000241 aaagatctcc aacagcgcag cggctacagt tggcactgct tatttcttgc tTGCACCTGT GGGCCACCGT GGCTGGGGCC 000320 000321 TGTCAGACCT GTGCTGACGA CAGCCTACCT GGACATATTT CTCCATGCTC ACTGAGGCAG GGGAAAGGCC ACAGCAGGCC 000400 000401 ACaagtaatg tgtgtcaccc cacttccatt tctgtggcca aaggaagcca cagagccaca cctgagttcc ataggacggC 000480 000481 AGCAGCTGAT CATCCTATGG GCTGGGGTGC TCAGTATGGA GAAGTACAAG CAGCCACCCA GCGTGGGGCT GGTTGGTGCT 000560 000561 GCTGAGGATG GGAGGATGGG AGGGGCCTGC ATCCATCCCA GGGCAACATA CCtgtttgtc tgctggggct gcctgacaaa 000640 000641 ggaccgcagg ctaggggact taaacaacag acatttcctc atgattctgg agctagaagc ctgagatcaa ggtgtgggca 000720 000721 gggttggttt ctcctgaggc ctcgctcctt ggcctgcaga tagccatctt cttgccgtgt ccctgtctgt gtctgtgtcc 000800 000801 taatctctca taagctcact agtctattgg atcagggccc accctcatga cctcatttaa ccctgaatta cctctttaaa 000880 000881 gaccctgtct tcaaatgtaa gtactagggg ttaggacttg aacataaaaa tattgaaggg acatagttct gcccacagcG 000960 000961 GTGCCCGCGA TAGGCTTCTC TGGTTTTGTC TTTGCTGTTC CTGGCAGCGC TATATTGGGC AGGCTTCTGT GGTCTCCACA 001040 001041 TGCCTGTGTG CAGAGTCCCC CAGGCCCTGG GTTCTGGGGC CCATACTGAG GAGTGGGGAT GGCCAAGCCT TGGCTGTTGA 001120 001121 GTAGGCAGTG CCCAGTTGTG CTGTATGGGA TGCtgtttct cacttaagaa atctttccct acctgggggg tacaaaggca 001200 001201 ttatcctgta ttcccaggtt gtaactttct gcctttgaca ttcaaccttg agtccacctg taagtgTAAC TGCGGCagaa 001280 001281 gggaggggtc tgctgtcatc cttgatagcc tgtgatgagc agagcccctc tgccgaccgc gatgcacatg taatatgagc 001360 001361 aagaaataaa tttttgatgt gcgaa |
Predicted Small Protein
Name | NONHSAT083426_smProtein_407:703 |
Length | 99 |
Molecular weight | 10964.8163 |
Aromaticity | 0.0816326530612 |
Instability index | 51.3020408163 |
Isoelectric point | 7.70574951172 |
Runs | 15 |
Runs residual | 0.0140186915888 |
Runs probability | 0.0399634929046 |
Amino acid sequence | MCVTPLPFLWPKEATEPHLSSIGRQQLIILWAGVLSMEKYKQPPSVGLVGAAEDGRMGGA CIHPRATYLFVCWGCLTKDRRLGDLNNRHFLMILELEA |
Secondary structure | LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLHHHLLLLLLLEEEEEELLLLLLLE EELLLEEEEEEEELLEELLLLLLLLLLLLEEEEEEEEL |
PRMN | - |
PiMo | - |