NONHSAT083426

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT083426

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1385 nt

Genomic location

chr22-:19833669..19842386

Exon number

3

Exons

19833669..19834912,19841966..19842062,19842343..19842386

Genome context

Sequence
000001 GCGCGGCGCT CCTAGGAGCA GGCGTTCCCG ACTCCGGCAA GAGGGTGGCG CCTGGACTCT CGCCCTCAGA GGGAGGCCCG 000080
000081 TCCCACGGTC TGTGGCTACG GATCCCAGGA CCCTCTTCGC GGGCGATTCG CGTAGCCTCA GAACTGGAAA AGCCCAAAGA 000160
000161 TCCAGCAATA AAGGAGCAAG GCAAATAAAG CTGTTACCCT GCAGGatcag tcagcatgag ccagattgtg ctgcagtaac 000240
000241 aaagatctcc aacagcgcag cggctacagt tggcactgct tatttcttgc tTGCACCTGT GGGCCACCGT GGCTGGGGCC 000320
000321 TGTCAGACCT GTGCTGACGA CAGCCTACCT GGACATATTT CTCCATGCTC ACTGAGGCAG GGGAAAGGCC ACAGCAGGCC 000400
000401 ACaagtaatg tgtgtcaccc cacttccatt tctgtggcca aaggaagcca cagagccaca cctgagttcc ataggacggC 000480
000481 AGCAGCTGAT CATCCTATGG GCTGGGGTGC TCAGTATGGA GAAGTACAAG CAGCCACCCA GCGTGGGGCT GGTTGGTGCT 000560
000561 GCTGAGGATG GGAGGATGGG AGGGGCCTGC ATCCATCCCA GGGCAACATA CCtgtttgtc tgctggggct gcctgacaaa 000640
000641 ggaccgcagg ctaggggact taaacaacag acatttcctc atgattctgg agctagaagc ctgagatcaa ggtgtgggca 000720
000721 gggttggttt ctcctgaggc ctcgctcctt ggcctgcaga tagccatctt cttgccgtgt ccctgtctgt gtctgtgtcc 000800
000801 taatctctca taagctcact agtctattgg atcagggccc accctcatga cctcatttaa ccctgaatta cctctttaaa 000880
000881 gaccctgtct tcaaatgtaa gtactagggg ttaggacttg aacataaaaa tattgaaggg acatagttct gcccacagcG 000960
000961 GTGCCCGCGA TAGGCTTCTC TGGTTTTGTC TTTGCTGTTC CTGGCAGCGC TATATTGGGC AGGCTTCTGT GGTCTCCACA 001040
001041 TGCCTGTGTG CAGAGTCCCC CAGGCCCTGG GTTCTGGGGC CCATACTGAG GAGTGGGGAT GGCCAAGCCT TGGCTGTTGA 001120
001121 GTAGGCAGTG CCCAGTTGTG CTGTATGGGA TGCtgtttct cacttaagaa atctttccct acctgggggg tacaaaggca 001200
001201 ttatcctgta ttcccaggtt gtaactttct gcctttgaca ttcaaccttg agtccacctg taagtgTAAC TGCGGCagaa 001280
001281 gggaggggtc tgctgtcatc cttgatagcc tgtgatgagc agagcccctc tgccgaccgc gatgcacatg taatatgagc 001360
001361 aagaaataaa tttttgatgt gcgaa
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Predicted Small Protein

Name NONHSAT083426_smProtein_407:703
Length 99
Molecular weight 10964.8163
Aromaticity 0.0816326530612
Instability index 51.3020408163
Isoelectric point 7.70574951172
Runs 15
Runs residual 0.0140186915888
Runs probability 0.0399634929046
Amino acid sequence MCVTPLPFLWPKEATEPHLSSIGRQQLIILWAGVLSMEKYKQPPSVGLVGAAEDGRMGGA
CIHPRATYLFVCWGCLTKDRRLGDLNNRHFLMILELEA
Secondary structure LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLHHHLLLLLLLEEEEEELLLLLLLE
EELLLEEEEEEEELLEELLLLLLLLLLLLEEEEEEEEL
PRMN -
PiMo -