NONHSAT083574
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT083574 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
968 nt |
Genomic location |
chr22-:20992648..20993422 |
Exon number |
3 |
Exons |
20992648..20992718,20992898..20993063,20993177..20993422 |
Genome context |
|
Sequence |
000001 CTGTGATGCT GGACAGGAGC TGACAGCCGG GATCTGGGAG CAATACCTTC AGGATAGCAC AGCAAGGTTT AGCTGGGCTT 000080
000081 GATCTGCAGT GGTGTAGAGG CTGCAAAGGA GGGGCGATTT TGTTATGTGA GAAATAAGCC CACCTACTTG TGGGGACTCA 000160 000161 AGATGACTTG TTTGGATTCT GCATATGCAA ATTGAAGATC TCCTCCTCTT CTTGAGAGTT CCAAGACCCA CAACTCACTT 000240 000241 TTGCCCGTGC TGAGACATGG CCCCAGCCAG AAGGAATTTA CAGTCCAGTC AAAACTGCCT AGAAGTGTGA CAGCAGCTGA 000320 000321 GTTGGAGGGA GGCAGCTGAA CCAAGAAAAC CTTATCAGCA CTATTTGAAA CTTTTATCTC ATCTGGCTTG GCGCCTGAGG 000400 000401 TTCTCCCATT AGgaaattga aggcgtgtgg gagagcatat ggaacattcc ttcaaatgca tttggtcata gaagcctttA 000480 000481 CTGGAAAATA CCTCCCATGG CTAGTAAAAA GCAAAAATGA CTGAGAAGCA CTGGTTTATC TCTGCCAAGA ACAAAATCTA 000560 000561 GGAGGAGGTA CCTGTTTCCT CCACACTGGG TAAATCTAGT GGCCCAATCT GCTGTGCACC TTCCCACCCA GGTGCGTTCT 000640 000641 GGGGAGGGTT GAGCTGgttg agtgtatcaa gagttgattc ctttggatgg ctgagtgcta ttccataaga tggatgtagc 000720 000721 acagtttaac tgttcacctg ctgatggatg gctgagttat ttctagattt ttggctattg ctattaaagc tgtaatgaac 000800 000801 attcacgtac ggttgtttgt atgagcacag gttgtcattt ctctgggata gatgagtcag aatgtaattg ctaggtcata 000880 000881 cggtagttcc atgttcagtc gtataagaaa ctgccaaaca tcaacagtag catgtgcctt tagtcccagc tactctggag 000960 000961 gctgaggc |
Predicted Small Protein
Name | NONHSAT083574_smProtein_851:964 |
Length | 38 |
Molecular weight | 3952.3913 |
Aromaticity | 0.108108108108 |
Instability index | 79.6135135135 |
Isoelectric point | 9.49627685547 |
Runs | 8 |
Runs residual | 0.03644929333 |
Runs probability | 0.0419537184243 |
Amino acid sequence | MSQNVIARSYGSSMFSRIRNCQTSTVACAFSPSYSGG |
Secondary structure | LLLEEEEEELLLLHHHHEEELLLLEEEEEELLLLLLL |
PRMN | - |
PiMo | - |