NONHSAT083673
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT083673 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1529 nt |
Genomic location |
chr22-:21803801..21805329 |
Exon number |
1 |
Exons |
21803801..21805329 |
Genome context |
|
Sequence |
000001 GAGAGGCTCC CCTCAGCACC TGGCCCCACG GGGCCCGCCA AGTGGAGGGT GGGAGCCCTG GGGATCCTCC CTGCCCCAGT 000080
000081 GAGGTCTGTT ATGCAGCATT TTTGAGGTCA ATAAATTACA GCAATAAATA GCAAGGTGAG GTAGGGGGAG GGGGTCCTGG 000160 000161 TAGAAAGTTA AAGTGGGGTG ACTGAAGCCG GGGCATCCTA GGAAGGGGGT CCTGGGCAGC CTCAGTTCCC ACCGCTCATG 000240 000241 CCCACCCCCA CCCCGGCGTG GAATGTCAGA CTGAGGCTCC AGTTAGGTCC CTCCCCAGCC CTCACTCCTG GCGTCTGATT 000320 000321 CACAGGTTCA GTAACATCTG CCCCAACGGG GTTCTGGGAA ATAGGAGGAC CTTGGTCCCT TTAGGGGGCA TGCCAGGGCT 000400 000401 GAGAGCCCTT GTCTGCTCTA AGGCCTGGCA CCTTTGGCTT TTGTCCCCCA CGCCTGGGGG TGGACGGATG CAGCCTCCTG 000480 000481 CTCCCTGAGC CCTGCCCTCC GGCTGCCCAG GCCTCACCCC AACTCAGGAT GGCCGCAGGA GGGCAGGGGG TCAGCCTGCC 000560 000561 CAGCGGCCCA GCCCGGATCG CACTCCTGCA CAGGGCCTGA GGTCCAGTGA ATACTGACGG ATTTTGGGAG TGGGTGGGCG 000640 000641 GCCCGGTGCC CCCGAGTGGT GATGAACGGT AAACACACAG GGCTGCCTGA GGTGGGGAAA GTTGGTGAGG GTCCGGATCG 000720 000721 TTCATTTCAC AGGCTGAGGT GTATGGCTAT GCTGCGAGTC TCTGAGATTC TTATTTGCTT AAAGGTTCAT CTTTTCTCTT 000800 000801 CCTTTTTTTT TTGCAATCCT GGAGGAGCCC TTGCTGGGGC TCGGTCCGGC GGGAGCATGC AGTGGCGGAG CCCGGCCTGC 000880 000881 CACCCGCTCA CTCGCCCCAA GTCTGAGAAA TAAATACATT CATCACTGCA CAAACATATT GATACAAAAA CAACACTGTT 000960 000961 AAGAGTGTTT GCACCGTCTA TGTTGGTAAG GACCAGACCC AGTCAGCCCC TTCCGCTGCC TGGGGTGGGG TTAGGGGGCC 001040 001041 CCAGGAGTGG GGACCCACCA GAGTCGACAG AGCTGCGCAA AGGTCCCGGC TTTTTGGCTT GAGTGGGACC CTCGCATCAA 001120 001121 CCCATCCCCA AGGGTCACGG GCAGAGCAGC AGGGGGACCC AAGCCCAGAC TCGGGTCCTG TGGCCAGAAC TGACGGCCAT 001200 001201 CCCCGCGTAG GCTAGCTGGT CAGGACCAGC ATGGTCCGGC CAGAGGGCCT TGGGGGCTGG TCAGCACGGG CCCAAGCTCT 001280 001281 TTGGTGCCAG CTGGGCTTGG AGGGGCCCTG GGAATGGGGA CGAGGGCTCA GGTGACTCCA GGGAGGCTTC CAATCCCTCC 001360 001361 CCCAGCCCCA GGGCTACCCT TCTCTGCCCG TGAGCCACTC CAGGGCCAAC TCAGAAGGGT TTCCAGCAGC AGGGGAGGGT 001440 001441 TCCCTGGACT GGCCTTACAG CTGCTGAGGT CTGAAACTGT AAAAGCTTAT GTAAACAATG AGATAAATAT ATTAGCATCT 001520 001521 TTTTTCTGA |
Predicted Small Protein
Name | NONHSAT083673_smProtein_1313:1528 |
Length | 72 |
Molecular weight | 7644.7725 |
Aromaticity | 0.0704225352113 |
Instability index | 81.8802816901 |
Isoelectric point | 11.6162719727 |
Runs | 9 |
Runs residual | 0.0217939214233 |
Runs probability | 0.0388722055389 |
Amino acid sequence | MGTRAQVTPGRLPIPPPAPGLPFSAREPLQGQLRRVSSSRGGFPGLALQLLRSETVKAYV NNEINILASFF |
Secondary structure | LLLEEELLLLLLLLLLLLLLLLLLLLLLLLLLEEEEELLLLLLHHHHHHHHHHHHHHHHH HLHHHHHHHLL |
PRMN | - |
PiMo | - |