NONHSAT083959

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT083959

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3665 nt

Genomic location

chr22-:24025914..24035781

Exon number

3

Exons

24025914..24026054,24029018..24029182,24032423..24035781

Genome context

Sequence
000001 GTTTGGTTTT CTGCCCCCGA GGGACCTGAA TGCATCATGG CCTAGAACCC AACAAGGGTG GGAAGAGAGA GTGACATTTT 000080
000081 CTCCCAGGCC ATCCACACTC TAAGAACTAG AAGGTGGCTC AGGCCTGCCC ATCCTGAGGC CTCGTCTTCC TCCCATCCCA 000160
000161 ATCAGCCCTC TACTACTCCT CTCCGTACCG GTGCACTTTC CTTGTGGCAG CTGCAACTAT GGGCTCTGTT TGGGTGTCTA 000240
000241 CCATAGAATC CAGTATGCAT CAGGTACCTA ATAAGTGCTG AGGGTAGTGA GGCTCCTGAG CAGCTGGGTG AGTGACCCAT 000320
000321 GGCCCTGCCT GCCCCACAGT GAGCACCTGC CCTGCCCTGC TTTCTGTCCA TCTCCTGTCA CTCAGTCTGC ACAGTCACTC 000400
000401 TGTGCAGCTG GCGCTGGTGA TGTCCCATCT CTGCCGTCCA CATGCAGACA GGGAAGGCTT GTGGGTGAGG AAACTCATCC 000480
000481 AGATCCCACG GTTGGTAAGA AGTGGGGCTG AAATTGGACC GAGGGCATTG GCTGCTCCTC AGGGAGAGGC TGGTCTGAGA 000560
000561 CAGCTGGTGC CAGAGACACA GCCTGCAAAG CTCAGCTGCT CACCGCATCC ATGAGGGTCA GCTGCTCTGC CAGCAGCCTG 000640
000641 GGAGGGAAGG TCGTCATGTC AGGCAGCTCC TCACTGGGTT GGTTCTTTAC AGACCCACGA CAGGGACAGG AGGACTCTGG 000720
000721 GGCTGACTGT GGCTCCAGCA CTGTCCCTGG AGGGGGCCCT TCCCCTGGTG CTGGTGCTGG CCCTGGTGCT GAATGTAGAT 000800
000801 ATCCTGGTGG ACCCAGGGCT GCAGGTGACT CTGGCTCCAG AGCAGGCCCC AGGTCCGCCA GCAGTGGTGG TGCTGGCTCC 000880
000881 AGGGCCGGCA TTGTTAATGC GTGTTGCCCA GGACGTGGAG CAGGATCTGG AAAAGGAGAA AAGGTCACCA CACCAGTCAT 000960
000961 TTTTCACTGG GTTTTCCAAG CACAGAAATG ACCGGGTGGA ATTTAAGGGA ATTGTAGCCC CAAAACACCA CCCCCGGAAA 001040
001041 GTCTTGCAGA CTGCAAGCCC CCTCACCATC TGGCTTGGCC TCGTTGGGCT CCGGAAGCAC CAACTGGCCT AGGACAATTT 001120
001121 CCTGATGGTC CTCCAAGCCC AGTCCAGGCC AGGAGAGGTT CCTGAAGGCC AGCTTTATCC GGAAAGATGA CCGTTGCGGG 001200
001201 GGCTGATAGT AAACTGAAGT GTTTTCGGGG GGCCAGTTGA ACAAAATGGA GGTGATGGTG CTGGTGATGG AGTAGACAGC 001280
001281 TGAGTCAGAG GCCTGGCCTT CTCCCACACA ACCCTCCAGG GCACCCCTGC GTGGTTCTGG GTCCCTGGCC TGTTGCTGCC 001360
001361 AGTGTGGAGG ACAGCCCCAC CCTACCGTAA GCCATCAGTG CTGTCCTGGA AGGGGCAGAC CTGGCCATAC AGCAGGGCTG 001440
001441 TACAGACCCT CGTGCGCCCT GGCGTCCCAC AGACATTCTC TTCCCAAAGG CCCTGGAGCA CAGCACTGTA CACCTGGGCA 001520
001521 CTCAAGACTG CAGCTGCAGG CAGATTTGTG AGCAGCTTCC TCATCAAAGC TCCAGATCTG GGTCCCCTGG TCCTGGGGTT 001600
001601 AGGAGGGAAG GGGCAGATGT CGGGGGGAGG AGGACAGGGA GAGCTGGGAA GCCACGGTGC TGAGGGGGAT GGGTCTCTCA 001680
001681 GTGGCCAGCT GTGACCCCAG CCTCCCCTCT GCTTTGCAGG GGACCTAAGT CTCCATTTAC AGAACTCACT ATTTGCCTCT 001760
001761 TGTGGGGGAA GTCCCCAGAT GTCAGCCTTC TCGTGGGAAT TATAAGAAGT ATGAGCCCCA GAGCTCCTTT AGTCTCTCCC 001840
001841 CAGCCAGAGT CCACATATTT TCCCCCATGT TTTGTGGGTG AAAAGGCCCT TCAGAACCCT AAATCCACCC AGTTTATATT 001920
001921 TGTTGCTGGG CTGCGTCATT CTAGTCAGAA TCTGGGAGGA TGCCACCATA CGTAGAGGAG GCCATGAGGG TCtcacctgt 002000
002001 aacattctgt agatatgact tgtttattct gtctactgtg agtgcctgac tctgagtaga atcaaggccg ggggattgtc 002080
002081 atctgctttg tttatgaaat tatgccaagc cccaagaaga gcgatgcaca aatgaggtgt tttgaatgta tgtgttgaat 002160
002161 gagtgaaCCC CAACCTTTGG AGAACCCCAG TGAGCCTCTC CAGATGTCTG AGTGGGCCTG TGGCTCCTTT TTCAGCACCA 002240
002241 AGGGACCCCT CTTCTGTCTG TGTCAAGGAG AAAGACCAGC CAGAAGGAAT CTCAGACATC CTTTACCAGT GCCATCGCAG 002320
002321 ACTTGGTTTC TATGTGTTTT TCCAAACAGT GAGTGATACA GGCCATTGAG GCAGAATGCT GAGAGCTGCT TCAAGTGAGG 002400
002401 GGGAAGAGAA AAGTAACAAA CATGAATCAC AGCACCCCCA GCAGATTTTC CAGAGTTTTA GGCTCTAGGG ACCCCTTTGT 002480
002481 TTGCTGtgtc ttagatcatt gagtccctac aagaaccctg tgaggttcgt cttctcacta ctccctgttc cagaggagcc 002560
002561 aaccgaggct ccgagaggtg catcttcaag acagagccag taggggacag aggcaCCTCT GTGTCTTGGA GGGGGATGGA 002640
002641 CACTCACCTT CTAACCAGTA GTTCCAAAAA GTGTGGCACA GTGATAAAGT CCCAGGAGGG GCCCAGGCAG GTGGCATAGG 002720
002721 AGGAGATGGG TTTAGTTAGA AAGGCTGGAA CCAGGGACTC CCAACAGCTT CTCCCCAGTG CCGGGCTGGA AAGTTAGCAT 002800
002801 CCTGCAGATC TCATTTTCAT ACTAGGGGGA CAAGGAGGGA CATGGGAGTC AGTGGTAACA CCATGGACCA CCAGAGGATC 002880
002881 GGGATCTGGA ACTCACACCA AGAAGCACCA ACCCTTCAGG GACTTGTGCA TATGGAGAAC CTGGGTGCCC ATGGTGAAAA 002960
002961 GCGTTCTAGG CTTTCAAAGT AACATTGCAT GTGAGGATGG AGAATGATAA AACGATTCCT GCCTTCAAGG CATCGTCCCG 003040
003041 GTGTTTGTCA GCTGTGGGGC AACAGCACCC TCTGTGTCAG CAACCTGCAT GAAGAGCATC ATCCCTGCAA GTCCTCAAGG 003120
003121 CCTGGGGAGG CCTCATCCCC TCCTCATTTC AGCAACAGCA CACAGGACAA TACGCTCTAG AAGAACTCTT TGACTTAAAG 003200
003201 GTATATGATT GTTTTTGTTC CTTTAACATG AACGTGAGTC TGGAGAAACA GCTACGGCCA TCCCAGCCCT GGCCAAGGGG 003280
003281 AAAATGCCGG AAGACTCCAG GGTGGGAGGA AGCGCGTCCC AAGGCCCAGG ATCTGCGAGG CGACTTGGGG AAAACGCAGa 003360
003361 aaataaagca tgcgaagaag ttaacttggt gccattgggc agagggtgag agcccagcaa aCCGGAGAGA TCAGCTGCCC 003440
003441 ACATCAGTGG CGAGGAGTGC GGAGAGTGGG TGAGGCTGGG GCAGGAAGCA GGCCAGCCTG CCAGAGCCCA GGAACAGGTG 003520
003521 AAAGGACCTG CTGAAGCTCA CACCCGTGGA CCACCCAGAC TGCCTGCCGC TACAGGATGC CCTCCGCATC TCCCAGGACT 003600
003601 TCTTTCCGGC ATCAGTGTGG ACATTGACCC CACTGGACTG CAGTCACAGT GGACTCCCAA GGGGC
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Predicted Small Protein

Name NONHSAT083959_smProtein_3227:3472
Length 82
Molecular weight 9203.3531
Aromaticity 0.0493827160494
Instability index 54.2703703704
Isoelectric point 10.1057739258
Runs 12
Runs residual 0.00596844084703
Runs probability 0.0147279632574
Amino acid sequence MNVSLEKQLRPSQPWPRGKCRKTPGWEEARPKAQDLRGDLGKTQKIKHAKKLTWCHWAEG
ESPANRRDQLPTSVARSAESG
Secondary structure LLLLHHHLLLLLLLLLLLLLLLLLLHHHLLHHHHHHLLLLLLLLEEHHHHLLLEEEELLL
LLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -