NONHSAT083987
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT083987 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
755 nt |
Genomic location |
chr22-:24178954..24181191 |
Exon number |
3 |
Exons |
24178954..24179341,24179846..24179918,24180898..24181191 |
Genome context |
|
Sequence |
000001 GTGCTTGAGA AGGTTCAATG GCGTGGCAGG GACTAGCGGC CGAGTTCCTG CAGGTGCCGG CGGTGACGCG GGCTTACACC 000080
000081 GCAGCCTGTG TCCTCACCAC CGCCGCGGTG GTAAGCGGCC GGGCGGACCG GACGTCGCCT TGGTTACAGC CTCTGGCGGG 000160 000161 AGGGGTGAGG GTCGCCATGG TTACGGCGTG GCTCCCGGGC AGCTCTTGAC TGGCCCCTGG TTCCACAGCA GCTGGAGCTC 000240 000241 CTCAGCCCCT TTCAACTCTA CTTCAACCCG CACCTTGTGT TCCGGAAGTT CCAGGCACCG TTCCTGCCTT GGGCGCTCAT 000320 000321 GGGCTTCTCG CTGCTGCTGG GCAACTCCAT CCTCGTGGAC CTGCTGGGGA TTGCGGTGGG CCATATCTAC TACTTCCTGG 000400 000401 AGGACGTCTT CCCCAACCAG CCTGGAGGCA AGAGGCTCCT GCAGACCCCT GGCTTCCTGT GAGTGTTGAG AGCCCTCCCT 000480 000481 CCCTCTCCCC ACCCTCAGAA GGATCCCCAC CGATGGGGAC CTGTGCTGGC CTGTGCTCAA CACGGGCCCC TCCCCACAGA 000560 000561 AAGCTGCTCC TGGATGCCCC TGCAGAAGAC CCCAATTACC TGCCCCTCCC TGAGGAACAG CCAGGACCCC ATCTGCCACC 000640 000641 CCCGCAGCAG TGACCCCCAC CCAGGGCCAG GCCTAAGAGG CTTCTGGCAG CTTCCATCCT ACCCATGACC CCTACTTGGG 000720 000721 GCAGAAAAAA CCCATCCTAA AGGCTGGGCC CATGC |
Predicted Small Protein
Name | NONHSAT083987_smProtein_17:208 |
Length | 64 |
Molecular weight | 6530.5149 |
Aromaticity | 0.0793650793651 |
Instability index | 47.8222222222 |
Isoelectric point | 9.48919677734 |
Runs | 8 |
Runs residual | 0.0179786200194 |
Runs probability | 0.0439409998234 |
Amino acid sequence | MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVVSGRADRTSPWLQPLAGGVRVAMVTAWLP GSS |
Secondary structure | LHHHHHHHHHHLLLHHHHHHHHHHHHEEEEEELLLLLLLLLLLLLLLLLLEEEEEEEELL LLL |
PRMN | LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLL |
PiMo | ooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiii iii |