NONHSAT084315
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT084315 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
587 nt |
Genomic location |
chr22+:24347904..24349416 |
Exon number |
2 |
Exons |
24347904..24348402,24349329..24349416 |
Genome context |
|
Sequence |
000001 TTATTGTTCC AACTCTAGCT CTATCTATTG CCCTCCTCAT ATGAATCCCT CTCCCCATAC CCCATTCTCT AGTTAATCTT 000080
000081 AACTAGGCCT CCTGTTTATA TTAGCCACAT CAAGCCTAGC TGTCTACTCT ATCCTGTGAT CAGGATGAGC ATCTAATTTG 000160 000161 AAATATGCAC TCATCGGTGC ACTATGTACA GTGGCCCAAA CAGTCTCATA TGAAGTCACT CTAGCTATTA TCCTCCTATC 000240 000241 AGTCCTATTA ATAAGTGGTT CATTTAATTT GTATATACTC ATTGGAACAG AAGAATTTCT CTGGCTGCTC CTACCATCAT 000320 000321 GACCTCTGGC CATAATATGA CTTATTTCCA CACTAGCAGA AACCAGCCGA GCCTCTTTAG ACCTAACAGA GGGGGAATCA 000400 000401 GAATTAATCT CGGGCTTTAA CGTCGAATAT GCTGCAGGCC CATTTGCCCT GTTCTTTATA GCAGACTATA TAAATATCAT 000480 000481 TATAATAAAT GCCCTGAAGC TCATTTTAAC AAGTCTTTTT TTATGAATTC GAACATCATA TTCCTGATTC CATTATGATC 000560 000561 AGCTCATATA TCTCCTTGAA AAAATTT |
Predicted Small Protein
Name | NONHSAT084315_smProtein_164:223 |
Length | 20 |
Molecular weight | 2310.6553 |
Aromaticity | 0.105263157895 |
Instability index | 108.452631579 |
Isoelectric point | 9.70062255859 |
Runs | 5 |
Runs residual | 0.0123839009288 |
Runs probability | 0.0301183536478 |
Amino acid sequence | MHSSVHYVQWPKQSHMKSL |
Secondary structure | LLLLLEEEELLLHHHHLLL |
PRMN | - |
PiMo | - |