NONHSAT084317
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT084317 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
491 nt |
Genomic location |
chr22-:24350068..24352081 |
Exon number |
5 |
Exons |
24350068..24350194,24350299..24350374,24350788..24350881,24351805..24351883,24351967..24352081 |
Genome context |
|
Sequence |
000001 CAATGGGGCC CAAGCTGTTC CTGGACATGC ACTCAGCCCC CTGCCATGCT ATCCACTTTT GCCAGGCAGA ATGACATCCC 000080
000081 TTTTCAGCTG CAGACAGTGG AGTTGGCTTG GGGTGGGGGA GCACCTGAAG CCTGAGTTCC TGAAGGTGAA CCCCCTGGGG 000160 000161 AAGGTGCCTG CCCTCAGAGA TGGCGACTTC CTACATCGTT TTATACCTGA GTCGAAAGTA CCAGATACGG GGACACTGGT 000240 000241 ACCCACCTGA GCTGCAAGCC CGCACCTGCG TGGATGAGTA CTTGGCGTCA GCCCTGCAGC ACCTGGATGG GGGGGTCCTG 000320 000321 GTGGCCAGGC CCTTCCTGGC AATGGAGCAG ATCTCCCTGG AAGACAGCCC ACTGCCGTTG GCTGCGACCT CTTCCAAGAC 000400 000401 TGGCCCTGGC TGGCAGTGTG ACAGGCCCAT ATGAAGGCTG CCCTTGGTAC TGAGCTCTTC CTGGAGGCCC ACAAGCTCAT 000480 000481 ACTCCAGCCT C |
Predicted Small Protein
Name | NONHSAT084317_smProtein_179:433 |
Length | 85 |
Molecular weight | 9392.6868 |
Aromaticity | 0.0952380952381 |
Instability index | 48.1833333333 |
Isoelectric point | 6.02410888672 |
Runs | 11 |
Runs residual | 0.0030330603579 |
Runs probability | 0.0354579178109 |
Amino acid sequence | MATSYIVLYLSRKYQIRGHWYPPELQARTCVDEYLASALQHLDGGVLVARPFLAMEQISL EDSPLPLAATSSKTGPGWQCDRPI |
Secondary structure | LLEEEEEEEELLLEEEELLLLLHHHHHHHHHHHHHHHHHHHHLLLEEEELHHHHHHHLLL LLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |