NONHSAT084442

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT084442

Source

NONCODE4.0

Same with

,

Classification

sense

Length

5052 nt

Genomic location

chr22+:26036612..26043417

Exon number

2

Exons

26036612..26041010,26042765..26043417

Genome context

Sequence
000001 TTTCAAATTT TCTCATAGAA ACCACTTATA TTTAATACTT TCAAAAGTTC TTAACTTACA TTTTATAAAA AGCAATACAA 000080
000081 TTCTTTCTAC TAATTTTTGA AAAATTATCG TGATGGCGGG TGTTACATAC ACTAAAAAGT TAATCAATAT TCAGCATTTT 000160
000161 GCAGTGGTTC AAATATAGCA ACAAAGTAAA CACATTTCAC AAATATCTAC TAAGCAGGTG TTAGGTCACC ATTTTTTACT 000240
000241 CTTTAAGATC TGGAGAAATT GCAGCGATGA AGTGAACTTG TTAGGCAAAA TATTTCCTTA TTTTTGCCTC TCATATTTTG 000320
000321 CCCTAATCTA GGCCATGCTT CATTTGCTTT TTATATAATT TAAGGCTGAT GAAGGTAAGT TGCGTTCAGC CTAGGACACA 000400
000401 GTGATCTAGG ATTTAGCCAA AAGGCAAATA TCTTTCTTCC TGCTGCTCAA TTTTAGCAGC TCCATTTAAA CAGCTGGTAG 000480
000481 AAAGTAAAGC TTCAGTTTAT GTGCACATAG GAGGAAAATA ATATTTTGTG TTTTCTATTG TGTGTTGAAC TAAGTCCTTG 000560
000561 GCTTATTCTA CTGACCGACA ATGGAGATTT CCTTAAATAA ATAGGTAAAC ACATTCTAAG TTGGGTGTTC ATTCATTCAA 000640
000641 CTCCCTCTTT CCCTCATCCC TCCTCTTTCT GTCCTCTTCC TTCCTCCTTT CCCCCGACTT CCCTCCCTCT CCTTGTACCT 000720
000721 TTGCTCTTTC TTCTACCTTT CTTCCTTTGT TCTCTCTCCT GAGCTCTGTC TTTGTTACAG TCAATGCTCT TGTGCAAATG 000800
000801 TAGTAGAGAA TAAAACACCT GTACCCTATG CATTGCAGCT TACATTGTAG TGGGAGAGGT AGACAGTAAA GAAGCAAATA 000880
000881 TAAACATGCG ACAATTTTTG CTCATCGTAA GTGCTACAAA GTGTTTTGTG GTGTGTGTGT GTGAATGGAT GCGAGATAGA 000960
000961 GACAGCAGGA CAGTGAGAAT GAATGAGAAT CATGAAAGGC CTCCTCAAGG AAAGGGATAT GTGAAGTGAG CTAGTGAGCT 001040
001041 GTTCATTTAG AAGATCCAGG AAAAGTGTGT GAGGCAGTGG GAATAGCCGG TAAGAAACCC TGAGAAGGGA ATGAGCTTGG 001120
001121 TGTCAGAGAA ACTACAGTAC AGAAGCTTGG CCTAAGTGAA GTGAGCTTGG GGGGAGCACT GTGAGATGAG GCCAGAGAAG 001200
001201 GAAATGGTGA CTCCAGAGGA CGTGGGTAGG CTATGGTGAA GAGTTTCAGT TTGATTCCAA GTGTAGTCAA AAGACAGTGG 001280
001281 TCCATGTGTG GTATTATTTC ATTTTGTCAT TTAGACATTT TGAAAACATC TCTAATTTGA TCAAAATACT TAAGTTCAAA 001360
001361 TTCTCATGTT AGTTTTGTCT TCCAGAAATA GAAAAAGAAA TACATGTGGC AAAAACTGAC AACATTGAAA AAAGATGAAC 001440
001441 AAATCTACAA TTACAAATGG AGAGTTCAAC ACTTCACTGT TGATGATGGA TAGAATAAAT AGACAGATGG CCGCGCGGTG 001520
001521 GCTCACGCCT GTAATCCCAG CACTTTGGGA GGGCAAGGCG GGTGGATCAC CTGAGGTCAG GAGATCGAGA CCAGTCTGGC 001600
001601 CAACATGGTG AAACCCCGTA TCTACTAAAA ATGCAAAAAT TAGCCGGCCA TGATCGCGGG TGCCTGTAAT CCTAGCTACT 001680
001681 CGGGAGGCTG AGGCAGGAGA ATTGCTTGAA CCTGGGAGGC AGAGGTTGCA GTGAGCCAAG ATCGCGCCAT TGCACTCCAG 001760
001761 CCTGGGCGAC AGAGCAAGAC TCCATCTCAA AAATAAATAA ATAAATAAAC AGACAGACAT TCTGTAAAGA TTCAGAGGAT 001840
001841 GATCTTTTAT TTCTATGGAT TTAGGGGGTA CAAGTGCAAT TTTGTTACCT AGATACATTG CATAGTGGTG AACTCTGGGC 001920
001921 TTTTAGTGTA CATTGTACTC AATCTGTGAT TTTTCATGGC TTACTCCTCT CCCATCCTCC TGCCTTTTGG AGTTTCCAGT 002000
002001 GTCTATTATT TTACTCCCTA TGTCCATGTG TACCCATTGT TTAGCTCCCA CTTGTAAATG AGAATGTGCA GTATTTGAGT 002080
002081 CTCTGTTTCT GACTGACTTC ACTTAGGATA ATGGCCTTCA GTTCCATCTG TGTTGCTGCA GAGGACCATC TTGAAGAACT 002160
002161 CTATCAAGCC CACTTGGTTT AATTGCCTTT GTATTCTTTT AAATGAAACA CTCCACCCTA TAAGAACAGA ATGCACCCTT 002240
002241 TCTTCAAGTG CCATACAGCA TTCCGTTAGA TAGACCAAAA GTTTCAATGC ATTTAAAAGC ATTGAAATCA TACCAAGCAT 002320
002321 GTTCTCTGAC CACAACAGAG CTAAACAGAA AATCAGTGTC TGAAAAATCC CCAAATATTT TGAAATTAAA CTACACCCTT 002400
002401 CTGAAGGACT CACGGATCAA AGAAGAAATG ACAAGGGAAA TTAGAAAGTC CTTTGAAATG AATAAAAATG AAGAGACAAC 002480
002481 GATTACTCTT AAAATCAGAA TACTAACATA CGAACAGATA GAGATGTGTA TCCTTCCCAT TTGCCTGCTT CTTGAATTTC 002560
002561 CTACTTCCTG CCTATGTTGG GGTCGTTGCA GTTTCTCCAT GGGAGGAGCG TGGCTGTGCT CCTGCTGCAG GTGTGCGCCT 002640
002641 GACCCTGGTA AAGTCTGGCT ATGCCTATTT AACTAGTACT CTTAGTCATT CTACTCTAGT TTGAGTGAAC GAACACTTAC 002720
002721 CATTTTCAAA GGCCACGTTC CGGGAACTAT GAGGGGAATT TATGGATCAG TTACAGACCA GTTCAAGTTA CAAGATCCTT 002800
002801 ATGCTAATGT TAATTAAAAT CTCATCACAG CCACTTCCTT TTTCAGTCCC ACCTGGGGAA TTCTGGTCCA CTTCATCTCT 002880
002881 ACATGGTAGA CTTTGTGAGT CTTTCTTCAG TTCCTTTCTG CAGCTTCTGT TTCTGCGAAC TCTCCGTTTA ATTGTTTTGA 002960
002961 CTTTTTGGAA TTTTATAATC TTCAAGTATC TCTACCTTCA GTCTGGTATC AGCTTGTTCT ATTTAATTTT GTTTATCTAG 003040
003041 GCGTCACCAT TAGGCATTAA GCTAGGCACT AGGTTTTCAA ATGGAATGGG AGCCTTATAA ATCAGGTAAT TAATTAGTGT 003120
003121 GTGGTAAATA TTTTGACAGA ATGTTGGAAA GGCTAAGTAA ACATTCATTC AGTGAACATT TATTGGCCAC CTACTGTGTA 003200
003201 CCAGGCATTG TGCAATAGGG TCTGTCTCAT CAGAGAAGAC TTCAGAGCAC AGTTGGCTTT TGAGTCCAAT TCTGGTTATT 003280
003281 TCAGGAGTTT TCAAGGTACA GAGAGGGGCG TGGTATTCTA GGCAAAGGTG TTTAAAGGTG AGGCTTGTAG TTGTGAAGGA 003360
003361 GTAAAGCATG ACCTGGGAAT GGGTAATCTG CTCTGGCACT AGGTATTCGG TAGGGACTTG GAAATAGTGA GTGAGTGGCA 003440
003441 AGAGAAAGGA CTAGAAAGGT TTGGGAAGAA AGGACTAGAA GGGTTCTGGT GTTTTTTTTT TTGTTTGTTT GTTTTTTTTT 003520
003521 TAGGGAGTTT GGTCCTATTT TAGTGGGCAT AGTGTTTATT AGTGTCTTGG TGATTCTCAC CAACACATAC TGTCTGTATC 003600
003601 TCTTATTCCT TTGGTTGTTA TTTTGGTCAC TACAATGGTC AGCGGCTCCA AGTGGTGGTG GTGAATGCCA GCCCTGTCGT 003680
003681 ATCATACTTT TGTGGAAAGT GGGGGGCGGG GGTGAACATG AATAGAGAAG GAATCCTGAA GCAAGGAGCC AAGTATGTGG 003760
003761 TATTTTTCTG CCTGGAGTAT TTCCTTCTAG GAATTAATTA ATTCACTAGC TTCTTGAAAT CTTTTTTTTA AAAAAAAAAG 003840
003841 TAGAGGAGGA AGAGGTTGAG GTATAAACAC ATTGCTTTGA AAACACCCTT GTGGGATAAA ATTTCAATTA ATTGCCCACC 003920
003921 CTGAAATTTT TTATTTTTTT CCTTTAGGTT TCTTGCTATT TAAAGATTTT TGTTTGAATG AAATTAATGA AGCTGTACCT 004000
004001 CAGGTGAAGT TTTATGAAGA GGTAAGAAGT AACTGTTTTA CTGATGCTTT TCTTTCAAAA GCATATTTAA ACTGTACTTT 004080
004081 GGAACATATT AAGACTACTT AATATCTTAC AAATATTTAG AAATTCATTG AAAGTAATTA GTAGTGCAAA ATATAGTATC 004160
004161 AAGTTTGAGA TGCTAACAGG TATGAAAAGC TGAGTATGCC ATAAAAGTCG CATTCTTAAA GGCTTCAGAG TGCTATGGAA 004240
004241 GCAATGAGGG ACAGTTGGAC TAAAGTTCCA GAGATGGGAG GCTCATCCAG AGCTGCACCA AGGAGGACCA GTTATTTTAT 004320
004321 TTTCTGTGGA AGCGTGCTAG TTCTGGAGAT GTGAGCAGAG GCAGAGGACT GCTACTAGCT TTGAAAGAGA TACTAGCCAG 004400
004401 GATCACGAGG TCAGGAGTTC AAGACCAGCC TGACCAACAT GGTGAAACCC TGTCTCTACT AAAAATACAA AAATTAGCCA 004480
004481 GGTGTGGTGG TGCATGCCTG TAATTTCAGC TACTCAAGAG GCTGAGGCAG GAGAATCACT TGAACCCGGG AGGCAGAAGT 004560
004561 TGCAGTGAGC TGATATCTTG CCATTGCACT CTAGCCTGGG TGACCGAGGG AGACTTTGTC TCAAAAAAAA AAAAAAAAAA 004640
004641 AAAAAGAAAA AGAAAAAAAA TGAAATGGCC ATCATTAAAG GAGAGAAAGA TAATTGCCAG CCTAGAATTC TATTCCCAGC 004720
004721 AAAAATTTCC TTCAAAAATG GAGGACGAGG AGGTGGAGGA AGGAGAGGGC CCCGGGCCTC ACCTCCACCC ACCGCCCCCT 004800
004801 CCCACCACCC GGAGCTGCAG CAGCAGCGAC TCATGAGAGC ACAGCCAGAG GACAGATTTG ATAATGGGCT GCATTAAAAG 004880
004881 CAAAGAAAAC AAAAGTCCAG CCATTAAATA CCTGAAAATA CTCCAGAGCC TGTCAGTACA AGGGTGAGCC ATGGGAGCAG 004960
004961 AACCCACTGC AGTGTCACCA TGTCCATCAT CTTCAGCAAA GGGAACAGCA GTTAATTTCA GCCGTCTTTC CATTCCATTA 005040
005041 TACCATTTGG AG
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Predicted Small Protein

Name NONHSAT084442_smProtein_4664:4876
Length 71
Molecular weight 7724.7069
Aromaticity 0.0428571428571
Instability index 57.7428571429
Isoelectric point 10.8408813477
Runs 9
Runs residual 0.0162659123055
Runs probability 0.0402068735403
Amino acid sequence MAIIKGEKDNCQPRILFPAKISFKNGGRGGGGRRGPRASPPPTAPSHHPELQQQRLMRAQ
PEDRFDNGLH
Secondary structure LEEEELLLLLLLLEEEELLEEEELLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHL
LLLLLLLLLL
PRMN -
PiMo -