NONHSAT084487
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT084487 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
697 nt |
Genomic location |
chr22-:26877801..26879802 |
Exon number |
3 |
Exons |
26877801..26878206,26878712..26878839,26879640..26879802 |
Genome context |
|
Sequence |
000001 GGCTTGCCAG GAGCTGGAGG GGGAGGTAGG CGGGGCGGCG CGTGACCTAA GGCCTCTCTG CCGCGCGCGC AGGTACGGGG 000080
000081 CAGAAGTCGC AGGTACCCAG CTGCTGCCCA CATTTCTGGT CCAGAGTCCC GAACCCCGAG CACTGGGATG CCTGGCTACT 000160 000161 CCGagcgtta tccagactag cgagtgggag gcagatgtaa aatctggaac gcagatttta gtttgttgga aggagaaatg 000240 000241 taacatagtg aaccacgcat ctctggaggg tgtaaagcag agacagccaa gAGCCAAGGC ACTGATGTTT GAACTGGAAA 000320 000321 CTTCAAAACG TTTAATAAGA GTCTTCAGGA TGGGTTTGAA CTAGACAAGC TAGAAATTTC TTTAGAACAC CAGCTCTAGC 000400 000401 ATGCATCTCC CACTTTTGGC TTTCCTGGAG AGGAGCTTGA AGAGGTGGTT CTGCAGACAG CCACAGTGAT ACTTAGGAAA 000480 000481 CCAGAGGAAT GGATTTGACT TTTCTGCTAG GATTCTCTGT TATAGTTTCT CCCTGAGTTG TAAGAGGCAT GGAAATATAC 000560 000561 ATGAAACTGA AGAACCTGCA AGGAAGGGAA GTGGAACTTT CCATGCTGAG TGAAAACTAA CCAAGTGGCA GTTGTGACTG 000640 000641 AAAACACTGA AACCTACCAC GTCCAGATTC ACTGGATTGG GGGATAGAGG AACGGTC |
Predicted Small Protein
Name | NONHSAT084487_smProtein_548:619 |
Length | 24 |
Molecular weight | 2756.2221 |
Aromaticity | 0.0434782608696 |
Instability index | 52.2086956522 |
Isoelectric point | 4.94464111328 |
Runs | 6 |
Runs residual | 0.0331262939959 |
Runs probability | 0.0309574280162 |
Amino acid sequence | MEIYMKLKNLQGREVELSMLSEN |
Secondary structure | LHHHHHHHHHLLLEEEHHHHLLL |
PRMN | - |
PiMo | - |