NONHSAT084488

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT084488

Source

NONCODE4.0

Same with

,

Classification

sense

Length

575 nt

Genomic location

chr22-:26877824..26879794

Exon number

3

Exons

26877824..26878206,26878712..26878839,26879731..26879794

Genome context

Sequence
000001 AGGAGCTGGA GGGGGAGGTA GGCGGGGCGG CGCGTGACCT AAGGCCTCTC TGCCGCGCGC GCAGagcgtt atccagacta 000080
000081 gcgagtggga ggcagatgta aaatctggaa cgcagatttt agtttgttgg aaggagaaat gtaacatagt gaaccacgca 000160
000161 tctctggagg gtgtaaagca gagacagcca agAGCCAAGG CACTGATGTT TGAACTGGAA ACTTCAAAAC GTTTAATAAG 000240
000241 AGTCTTCAGG ATGGGTTTGA ACTAGACAAG CTAGAAATTT CTTTAGAACA CCAGCTCTAG CATGCATCTC CCACTTTTGG 000320
000321 CTTTCCTGGA GAGGAGCTTG AAGAGGTGGT TCTGCAGACA GCCACAGTGA TACTTAGGAA ACCAGAGGAA TGGATTTGAC 000400
000401 TTTTCTGCTA GGATTCTCTG TTATAGTTTC TCCCTGAGTT GTAAGAGGCA TGGAAATATA CATGAAACTG AAGAACCTGC 000480
000481 AAGGAAGGGA AGTGGAACTT TCCATGCTGA GTGAAAACTA ACCAAGTGGC AGTTGTGACT GAAAACACTG AAACCTACCA 000560
000561 CGTCCAGATT CACTG
[back to top]

Predicted Small Protein

Name NONHSAT084488_smProtein_449:520
Length 24
Molecular weight 2756.2221
Aromaticity 0.0434782608696
Instability index 52.2086956522
Isoelectric point 4.94464111328
Runs 6
Runs residual 0.0331262939959
Runs probability 0.0309574280162
Amino acid sequence MEIYMKLKNLQGREVELSMLSEN
Secondary structure LHHHHHHHHHLLLEEEHHHHLLL
PRMN -
PiMo -