NONHSAT084579
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT084579 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
703 nt |
Genomic location |
chr22-:27618853..27622760 |
Exon number |
4 |
Exons |
27618853..27618868,27619259..27619595,27620191..27620269,27622490..27622760 |
Genome context |
|
Sequence |
000001 CTTCTATCTT GTTGGTATTC TGTCTCCCTG GTGCTTCTCA TGTGCTGAGC TTGATAGAGA AGGTGACCTG GCAAGGAACT 000080
000081 GAAGGACATC TGGCAATGTA CTGAGTGAGG AACTGAGGCC CACAGTCCAG CAGTCTCCAA GGAATCAAAT CCCACAACAG 000160 000161 CCATGTGAGT GAGCATGGAA GTAGATCTTC CCCGGTCAAG CCCCCAGAAG GACCCAGCCC TGCGGACACC TTGACCGAAA 000240 000241 CCTGTGAGAG CTCCGGAAAT AGAGGAACCA GCATTCCCTC TGGAATACAT CAGCACTGTT GCCTTTGAGG CTGGCCTGCT 000320 000321 TGAATGCACA CCTGAGCTCC GGATTCACAG TGGAGGAAGC CAGATGCCAT GTCATGAGGG TGCTCAAGCA ACTTTTTGGA 000400 000401 GATGTATGTA TGGAGAGAAA CTGAGGCCTC CTGCCAACAG CCAGCACTAA CTTGGCAAGC ATGTTTGAGA GCCACCTGGG 000480 000481 AAGTGGAGCC TTCAGCCCCA GTTAAGCCTT CAGATGAGAC TGCAGTCCTG GCCACCATCT GGACTGCAAC TTCACAAGAG 000560 000561 CTCCTAAGCC AGAGCCATGC AGATGGATTC TTGGCCCCCA GAAATTGTGC CACTACATTT TGGGAAATTT ATTATGCAGC 000640 000641 CATAGATTAC CAATACACTC ACTATTTCTT TTTTCTGATG CCATACTAAA AAAAAAAAAA AAA |
Predicted Small Protein
Name | NONHSAT084579_smProtein_401:688 |
Length | 96 |
Molecular weight | 11027.2709 |
Aromaticity | 0.178947368421 |
Instability index | 62.8326315789 |
Isoelectric point | 4.52069091797 |
Runs | 14 |
Runs residual | 0.0183174471612 |
Runs probability | 0.0381936558407 |
Amino acid sequence | MYVWRETEASCQQPALTWQACLRATWEVEPSAPVKPSDETAVLATIWTATSQELLSQSHA DGFLAPRNCATTFWEIYYAAIDYQYTHYFFFLMPY |
Secondary structure | LLEEELLHHHLLLHHHHHHHHHHHLEEELLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHH LLLLLLLLHHHHHHHHHHHHHHHHHHEEEEEEELL |
PRMN | - |
PiMo | - |