NONHSAT084681

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT084681

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2036 nt

Genomic location

chr22+:29627671..29629851

Exon number

2

Exons

29627671..29629457,29629603..29629851

Genome context

Sequence
000001 GGTGAGTGCC CGCAATGCTG CCCCACAGCT CCTCTGGCCA TCCCCTCCAC CAGGTGGGCC CTTCCCTGCT CCTGACATGG 000080
000081 CCAGGATGAC CTGGGCCCTT TCATCTACTT GCCTCTTCAC TCAGCACCCC ACCACGGAGT GCCCTGCCCA CGCCTGGGCT 000160
000161 CCATGAAGTC CTCTCTTATG ttcactgacc cacattccct gggcacctac acttatcagg ctctgagctg ggcactgggt 000240
000241 ggggtcagac atgtccctgc ccttctggag cttccatgct gctgggagca gggctgggca gaggagaagc agcaatgctt 000320
000321 gccccatgtg accagggttt ctatgagggg ttttgggggt ttgggagccc caaggaagga agactcagcc tggacgaggt 000400
000401 ggagaactAG GTGCTGTGCT CATCCCCCTG TTAGACTACC AGGCAGCCTA GGCCTGTGGA CTCCGGGGCC CTCTCTCATG 000480
000481 CCCACTGCTC CAGGCTGCCT TGTCCTGTCG CTCAAGGCCA CCCTGGGCCT CCTTGCCTCC TGTATACCCA CAAATCCGTG 000560
000561 TGATTCCATT GCAGGTCCAC AGGGCCCCCC AGGGAGCCCT GGCCGGGCTG GAGCTGTGGG CACCCCTGGA GAGAGGGGAC 000640
000641 CTCCTGGGCC ACCAGGGCCT CCTGGCCCCC CTGGGCCCCC AGCCCCTGTT GGGCCACCCC ATGCCCGGAT CTCCCAGCAT 000720
000721 GGTGAGTCCC CCTGGGATCC CAGCAGGTGG AGGTGGGGGT GGAGTAGCCA TCAGCACAGT GCCCgctacc atctgccacg 000800
000801 tgccttctgt gtgccagccc tgctcacgat aggccacatg tgacccagtc ctccagcagg cgccgttgtc ctcctgtggt 000880
000881 tacaggtgag gaacactgag gaccagagag ggaaggtggc ttgccagggt cccacagcct gggcgtaggg gaacggcttc 000960
000961 aaacccaggc tgcctccaga acctgtgctT AGAGCCACCG GGCATCAGGC CCTCCCAAGC CTTGGAACTG GCTGGAATCC 001040
001041 AGTTCTCGGA ACACTGGGAC GCAAAAGACC CGGCGGCAGG AAGTGAGTCC TGAACTCCCA AGGCCACAGG CCCGGCCCCT 001120
001121 CCTCCAGGCC CTGACGTGCG TCCTTGGCTT CTTCCCTTTG GCAGCCCAGC CTGACCTGCC CATGGGCTGC CAGGGGTCAG 001200
001201 AGTGTGGAGC GCCAGGTTTC AGCCTCTTCT CCACTGTGTT TTTGGTGCAC AACCCAGCAC ACCATTCATT CATTCTGCCA 001280
001281 TCCCAGCATT CATtccatct cactatccat acgatgggga caatgacagt gccagcctcc cagagctgcg taacatccat 001360
001361 gtacagaagc ctggcacaca gtaggtggtg gataaatggt atcttttatt gtcattccca tttgacaggt gacagtacag 001440
001441 gctctgaaaa gtagaaagtg ttgctggatg tcaccagctg gattgcagtg gggttagaac ccacatctcc ctgcctcctg 001520
001521 gtcTTGCGGG ACCAACACTC TCCACACTCC TCACCCTGGA GCAGGTGCCC AGGTGGTACC AGCCATGCTG CAGGCTGCCC 001600
001601 CATAGGGCAG TCCAAGCTGT CTTGGCAGAG GTGGCAGGTG AAGACTAACC ACCCCACTCT ACCCAGCTCT ACTCACTCAT 001680
001681 CATCTTTGCT CACCCAGGAG ACCCATTGCT GTCCAACACC TTCACTGAGA CCAACAACCA CTGGCCCCAG GGACCCACTG 001760
001761 GGCCTCCAGG CCCTCCAGGG CCCATGGGTC CCCCTGGGCC TCCTGGCCCC ACAGGTGTCC CTGGGAGTCC TGGTCACATA 001840
001841 GTGAGTAGTT CTCCTTGTAC TCTCACCCAT GTGTCTGtcc atctttccat ctatgcatac atccatacat ctgtccatca 001920
001921 tccacccttg tatccatcta tccatccatc cattcatcct tccattcatt cattcaacaa gtatttattg agcacttaat 002000
002001 atgCAAACTA CCTTCCATAA ATCTTATTCA ATCCAA
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Predicted Small Protein

Name NONHSAT084681_smProtein_1181:1453
Length 91
Molecular weight 9883.0817
Aromaticity 0.111111111111
Instability index 61.9712222222
Isoelectric point 7.11444091797
Runs 13
Runs residual 0.00458553791887
Runs probability 0.0399698340875
Amino acid sequence MGCQGSECGAPGFSLFSTVFLVHNPAHHSFILPSQHSFHLTIHTMGTMTVPASQSCVTSM
YRSLAHSRWWINGIFYCHSHLTGDSTGSEK
Secondary structure LLLLLLLLLLLLEEEEEEEEEEELLLLLEEEELLLLEEEEEEEELLEEEELLLLHHHHHH
HHHHHHHHHHHHLEEEELLLLLLLLLLLLL
PRMN -
PiMo -