NONHSAT084692

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT084692

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1818 nt

Genomic location

chr22+:29687918..29696515

Exon number

7

Exons

29687918..29688158,29688477..29688595,29692229..29692358,29693817..29693939,29694723..29695270,29695589..29695841,29696112..29696515

Genome context

Sequence
000001 AGCAAACCAG CAAAGGAAAA AAGCAAACCC TAGCAAACCT TTCACAAATG TTAAAGAGAC ACTGCTCCAT TTTAGCAGTG 000080
000081 CGGGTCATTT TGAGTTTAAT GAATCCCCAT CAAATGGTGG TATAGTAGAT AGCTATGTGT GTTTGTAAGG TTTGTAGCTT 000160
000161 GCAAGACGTG CACTAATAAT ATTTTATATG ATCTTTCCTG GTTGGCAGGA CCCATGGATG AAGGACCAGA TCTTGATCTA 000240
000241 GGCCCACCTG TAGATCCAGA TGAAGACTCT GACAACAGTG CAATTTATGT ACAAGGATTA AATGACAGTG TGACTCTAGA 000320
000321 TGATCTGGCA GACTTCTTTA AGCAGTGTGG GGTTGTTAAG ATGAACAAGA GAACTGGGCA ACCCATGATC CACATCTACC 000400
000401 TGGACAAGGA AACAGGAAAG CCCAAAGGCG ATGCCACAGT GTCCTATGAA GACCCACCCA CTGCCAAGGC TGCCGTGGAA 000480
000481 TGGTTTGATG GGAAAGATTT TCAAGGGAGC AAACTTAAAG TCTCCCTTGC TCGGAAGAAG CCTCCAATGA ACAGTATGCG 000560
000561 GGGTGGTCTG CCACCCCGTG AGGGCAGAGG CATGCCACCA CCACTCCGTG GAGGTCCAGG AGGCCCAGGA GGTCCTGGGG 000640
000641 GACCCATGGG TCGCATGGGA GGCCGTGGAG GAGATAGAGG AGGCTTCCCT CCAAGAGGAC CCCGGGGTTC CCGAGGGAAC 000720
000721 CCCTCTGGAG GAGGAAACGT CCAGCACCGA GCTGGAGACT GGCAGTGTCC CAATCCGTAT GTACTTGTCT TGGCAAATTG 000800
000801 ATACCCTACG AGTGAAGCCA CCCTTCCCTC ACCCCATCCC CACTCTAGAG TGGATTGCTC TGTCTAGAGG AACAGAATGA 000880
000881 TGACCCTGAT GGCTGGTTAG GGACACTAGT CAGCCATTCA CTGGACGCTT CAGAGCCTTC TGAAGATTGA TTTGACCTGT 000960
000961 CCTGTGGGTG CAATGCTGCC TGAGGCTGTG CCCTAAAGCA TGGGTGTACA TAGATCCTCT TGATAGTGAG TGTGTACCTG 001040
001041 TTCACACACC ACCTTTCCTT GTTTATCTTC CTTAGTTCAA TTGGTGATTT CTGCTGTGAT GTAATTGTAT GCAGGGGTTG 001120
001121 TGGAAACCAG AACTTCGCCT GGAGAACAGA GTGCAACCAG TGTGGTGATC GTGGCAGAGG TGGCCCTGGT GGCATGCGGG 001200
001201 GAGGAAGAGG TGGCCTCATG GATCGTGGTG GTCCCGGTGG AATGTTCAGA GGTGGCCGTG GTGGAGACAG AGGTGGCTTC 001280
001281 CGTGGTGGCC GGGGCATGGA CCGAGGTGGC TTTGGTGGAG GAAGACGAGG TGGCCCTGGG GGGCCCCCTG GACCTTTGAT 001360
001361 GGAACAGATG GGAGGAAGAA GAGGAGGACG TGGAGGACCT GGAAAAATGG ATAAAGGCGA GCACCGTCAG GAGCGCAGAG 001440
001441 ATCGGCCCTA CTAGATGCAG AGACCCCGCA GAGCTGCATT GACTACCAGA TTTATTTTTT AAACCAGAAA ATGTTTTAAA 001520
001521 TTTATAATTC CATATTTATA ATGTTGGCCA CAACATTATG ATTATTCCTT GTCTGTACTT TAGTATTTTT CACCATTTGT 001600
001601 GAAGAAACAT TAAAACAAGT TAAATGGTAG TGTGCGGAGT TTTTTTTTCT TCCTTCTTTT AAAAATGGTT GTTTAAGACT 001680
001681 TTAACAATGG GAACCCCTTG TGAGCATGCT CAGTATCATT GTGGAGAACC AAGAGGGCCT CTTAACTGTA ACAATGTTCA 001760
001761 TGGTTGTGAT Gttttttttt tttttttaaa taaaattCCA AATGTTTATA AAGAGTCA
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Predicted Small Protein

Name NONHSAT084692_smProtein_1193:1453
Length 87
Molecular weight 8867.8629
Aromaticity 0.046511627907
Instability index 46.8662790698
Isoelectric point 11.9066772461
Runs 9
Runs residual 0.0349704963554
Runs probability 0.0403050108933
Amino acid sequence MRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMG
GRRGGRGGPGKMDKGEHRQERRDRPY
Secondary structure LLLLLEEELLLLLLLLLEELLLLLLLLLLLLLEELLLLLLLLLLLLLLLLLLLHHHLLLL
LLLLLLLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -