NONHSAT084692
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT084692 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1818 nt |
Genomic location |
chr22+:29687918..29696515 |
Exon number |
7 |
Exons |
29687918..29688158,29688477..29688595,29692229..29692358,29693817..29693939,29694723..29695270,29695589..29695841,29696112..29696515 |
Genome context |
|
Sequence |
000001 AGCAAACCAG CAAAGGAAAA AAGCAAACCC TAGCAAACCT TTCACAAATG TTAAAGAGAC ACTGCTCCAT TTTAGCAGTG 000080
000081 CGGGTCATTT TGAGTTTAAT GAATCCCCAT CAAATGGTGG TATAGTAGAT AGCTATGTGT GTTTGTAAGG TTTGTAGCTT 000160 000161 GCAAGACGTG CACTAATAAT ATTTTATATG ATCTTTCCTG GTTGGCAGGA CCCATGGATG AAGGACCAGA TCTTGATCTA 000240 000241 GGCCCACCTG TAGATCCAGA TGAAGACTCT GACAACAGTG CAATTTATGT ACAAGGATTA AATGACAGTG TGACTCTAGA 000320 000321 TGATCTGGCA GACTTCTTTA AGCAGTGTGG GGTTGTTAAG ATGAACAAGA GAACTGGGCA ACCCATGATC CACATCTACC 000400 000401 TGGACAAGGA AACAGGAAAG CCCAAAGGCG ATGCCACAGT GTCCTATGAA GACCCACCCA CTGCCAAGGC TGCCGTGGAA 000480 000481 TGGTTTGATG GGAAAGATTT TCAAGGGAGC AAACTTAAAG TCTCCCTTGC TCGGAAGAAG CCTCCAATGA ACAGTATGCG 000560 000561 GGGTGGTCTG CCACCCCGTG AGGGCAGAGG CATGCCACCA CCACTCCGTG GAGGTCCAGG AGGCCCAGGA GGTCCTGGGG 000640 000641 GACCCATGGG TCGCATGGGA GGCCGTGGAG GAGATAGAGG AGGCTTCCCT CCAAGAGGAC CCCGGGGTTC CCGAGGGAAC 000720 000721 CCCTCTGGAG GAGGAAACGT CCAGCACCGA GCTGGAGACT GGCAGTGTCC CAATCCGTAT GTACTTGTCT TGGCAAATTG 000800 000801 ATACCCTACG AGTGAAGCCA CCCTTCCCTC ACCCCATCCC CACTCTAGAG TGGATTGCTC TGTCTAGAGG AACAGAATGA 000880 000881 TGACCCTGAT GGCTGGTTAG GGACACTAGT CAGCCATTCA CTGGACGCTT CAGAGCCTTC TGAAGATTGA TTTGACCTGT 000960 000961 CCTGTGGGTG CAATGCTGCC TGAGGCTGTG CCCTAAAGCA TGGGTGTACA TAGATCCTCT TGATAGTGAG TGTGTACCTG 001040 001041 TTCACACACC ACCTTTCCTT GTTTATCTTC CTTAGTTCAA TTGGTGATTT CTGCTGTGAT GTAATTGTAT GCAGGGGTTG 001120 001121 TGGAAACCAG AACTTCGCCT GGAGAACAGA GTGCAACCAG TGTGGTGATC GTGGCAGAGG TGGCCCTGGT GGCATGCGGG 001200 001201 GAGGAAGAGG TGGCCTCATG GATCGTGGTG GTCCCGGTGG AATGTTCAGA GGTGGCCGTG GTGGAGACAG AGGTGGCTTC 001280 001281 CGTGGTGGCC GGGGCATGGA CCGAGGTGGC TTTGGTGGAG GAAGACGAGG TGGCCCTGGG GGGCCCCCTG GACCTTTGAT 001360 001361 GGAACAGATG GGAGGAAGAA GAGGAGGACG TGGAGGACCT GGAAAAATGG ATAAAGGCGA GCACCGTCAG GAGCGCAGAG 001440 001441 ATCGGCCCTA CTAGATGCAG AGACCCCGCA GAGCTGCATT GACTACCAGA TTTATTTTTT AAACCAGAAA ATGTTTTAAA 001520 001521 TTTATAATTC CATATTTATA ATGTTGGCCA CAACATTATG ATTATTCCTT GTCTGTACTT TAGTATTTTT CACCATTTGT 001600 001601 GAAGAAACAT TAAAACAAGT TAAATGGTAG TGTGCGGAGT TTTTTTTTCT TCCTTCTTTT AAAAATGGTT GTTTAAGACT 001680 001681 TTAACAATGG GAACCCCTTG TGAGCATGCT CAGTATCATT GTGGAGAACC AAGAGGGCCT CTTAACTGTA ACAATGTTCA 001760 001761 TGGTTGTGAT Gttttttttt tttttttaaa taaaattCCA AATGTTTATA AAGAGTCA |
Predicted Small Protein
Name | NONHSAT084692_smProtein_1193:1453 |
Length | 87 |
Molecular weight | 8867.8629 |
Aromaticity | 0.046511627907 |
Instability index | 46.8662790698 |
Isoelectric point | 11.9066772461 |
Runs | 9 |
Runs residual | 0.0349704963554 |
Runs probability | 0.0403050108933 |
Amino acid sequence | MRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMG GRRGGRGGPGKMDKGEHRQERRDRPY |
Secondary structure | LLLLLEEELLLLLLLLLEELLLLLLLLLLLLLEELLLLLLLLLLLLLLLLLLLHHHLLLL LLLLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |