NONHSAT084733
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT084733 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
538 nt |
Genomic location |
chr22-:30202825..30206277 |
Exon number |
3 |
Exons |
30202825..30202893,30204100..30204174,30205884..30206277 |
Genome context |
|
Sequence |
000001 AAAAGAGGCA GCTGCAGTTT CACTTGCCAG GGCAACAGGG CAATATATTC CACATGCAGT GCATCTAGTT CTGGAAAGGA 000080
000081 AGAATTCCCA TGAGTGAGCA TGATCAGGAA GTGCATGGGA GGAGATGGGC CTGGAATGCT GCATggagga ggaggagaat 000160 000161 gaggagaaag aagagaagAG CAGTGGCCAG CATTAGCCTG AGAGGAAGCC AGAGGGCTGT GGGAGTGCTG ATCTCTGGAA 000240 000241 GAATGTTGAG GGGTTGTGCG GCTGGGATGG AGAGTTTGAA TTTGAGTTGG GAAAGGGTGG TATGAAATCA CCTAGGTGAG 000320 000321 AAGCAAGATT GGCTGTATAC CGTGACAGAT ATGGATGTAC CAGAGAGAAT AATTATGGTT TGCTGTCATA AGAGACTAGC 000400 000401 TTCCTTCTAC GAAGCAGCAA TTCCCGAAAT GGAGTCTGCA ATTAAGAAGA GGAGGCTTGA AGATAGCAAG CTTCTTGGTG 000480 000481 ACCTGTGGCA GAGGCTCTCC CATTCCAGGA AGAAGCTAAT GGAGATTTTC CACATCAT |
Predicted Small Protein
Name | NONHSAT084733_smProtein_89:304 |
Length | 72 |
Molecular weight | 8287.5588 |
Aromaticity | 0.056338028169 |
Instability index | 85.838028169 |
Isoelectric point | 12.0601196289 |
Runs | 13 |
Runs residual | 0.0345441067457 |
Runs probability | 0.0495835201718 |
Amino acid sequence | MSEHDQEVHGRRWAWNAAWRRRRMRRKKRRAVASISLRGSQRAVGVLISGRMLRGCAAGM ESLNLSWERVV |
Secondary structure | LLLLHHHHLLLHHHHHHHHHHHHHHHHHLLEEEEEEELLLEEEEEEEEELHHHHHHHHHH HLLLLLEEEEL |
PRMN | - |
PiMo | - |