NONHSAT085051
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT085051 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
778 nt |
Genomic location |
chr22+:35682875..35689021 |
Exon number |
3 |
Exons |
35682875..35683445,35684231..35684400,35688985..35689021 |
Genome context |
|
Sequence |
000001 GAATCATTGA GACTTATGAT ATGAAGGTCA TATAGGAGCA AGATGTCATC TAGATGAACA GCCATTCTTC ACCCAGATTA 000080
000081 TCCTTAGTTT TTGTTTTCCT TGTTATTGTT ATTCTGCTAT TGTGTTGGTA TTGCCAACTA GCAGGTTAGT AGAACCACAT 000160 000161 AGACATTATA TTGAGCCAGA GGTTTAATCT GTGATTTTAC ATTTCAACTT AGAGTGATCT AAAAATCAGT GCCGAGATTT 000240 000241 GACCATTAGC ATTGAGGAAT GTTTATAGTC CTTTACTAAG ATATTAATGT AGTCAGCTGT CTGAAGTCAG TTCGGTGACC 000320 000321 CCCAGCTTAA AAGTTAGCAT TAACCCTCTG TCTGCCCGCC TCTTACTATT GCCTTTCTTT TCTCCATTTT GTTCTTTCAT 000400 000401 GACTGCTTTT CCTTTTACAT TTTGTCCTTC TTAATTTAAT TTAATGTTCA CTGATGTGAT TGCAGATTTG GAAGCAAAAA 000480 000481 GCTCAGTATC TGCAGCACAA ACAGAACAAA GCAGAAGCCA CAACTGTGAA AAGGAAAGCA TCCAGCTCAG AAGGTTCCAT 000560 000561 GAAAGTCAAA GCCTCTTCTG TAGGAGTACT GTCACCCCAG AAGAAGTCCC CACCCACCAC CATGCTGTTA CCAGCCTCAC 000640 000641 CAGCCAAAGC CCCTGAGACA GAGCCCATTG ATGTTGCTGC TCATCTTCAG CTGTTGGGAG AGTCCCTAAG CCTCATTGGA 000720 000721 CACCGTCTGC AGGAAACTGA GGGTATGGTG GCTGTGTCTG GCAGTTTGTC AGTGCTTC |
Predicted Small Protein
Name | NONHSAT085051_smProtein_443:655 |
Length | 71 |
Molecular weight | 7826.5144 |
Aromaticity | 0.0428571428571 |
Instability index | 89.69 |
Isoelectric point | 5.87969970703 |
Runs | 13 |
Runs residual | 0.0408769448373 |
Runs probability | 0.0416615710733 |
Amino acid sequence | MFTDVIADLEAKSSVSAAQTEQSRSHNCEKESIQLRRFHESQSLFCRSTVTPEEVPTHHH AVTSLTSQSP |
Secondary structure | LLLHHHHLLLLLLLLLHHHLLLLLLLLLHHHEEEHHHHLLLLLLEEELLLLLLLLLLLLE EEEEEEELLL |
PRMN | - |
PiMo | - |