NONHSAT085056

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT085056

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1733 nt

Genomic location

chr22-:35738650..35740638

Exon number

2

Exons

35738650..35738949,35739206..35740638

Genome context

Sequence
000001 CAGGCAGGAG CAGAGCCCAG AGAGAAGGCA GGAGCCGACT TCCCAGCAGC AGTGGCAACA GCAAGTGCCC AGCTGTGCAC 000080
000081 ACCGGCTCCG TCTCCCGCTC CGCTATCCCC ATCGCCTCTT AGCTGCCAGA CGGGCTACCT TGTCCTTGCC CGAGACTCAA 000160
000161 GAGCAGGAAC CGGGCACAGA GGAGCTGCGG AAGCTGGGCT GGCCGGGCCA ACCCGGAAAC AGCCTGAGCC CTGGGGTCCC 000240
000241 GCAAGACCCT CAGCTGCCCC TCCTTGCTCC TCTGGGCCTT CTCCTGGGTC CCACTCCCTT GGAGAGCAGC ACGGTGCCCC 000320
000321 ACGCCCATGC CTGGCAGGAG CCCTGCGAGC ACCCCCAGCT TTCCGGGTGG CCGGGCCTGG CCCCTGCTCA CCATGCCTTG 000400
000401 TCTCACCATC CAGTCACTGA GGCTTTTCCC GCAGCCGCCT CCCATCTGGG TGAGAGAGAG TCACGCTGAT GGCGGAGGGA 000480
000481 CGGCAGCGCC AGGGCCACTG GAGGGCGCGG CTTCTAACAG GGGTGCGCCT TTCGGGTCAG GAGGCCTGCT GCCACTTTGG 000560
000561 GAGGCgtgtg tgtgtagggg tgtgtgtagg tgtgtaaggg tgtgtatgta ggtgtatgag tgtaggtgtg tgtgtaggtg 000640
000641 tatgagtgta ggtttgtatg tgtaggtgta ggttgtgtag gtatagatgt atgtggtgtg tgtaggtggt gtgtgtagat 000720
000721 gtgtgtggtg tgtgtagggg tgtgtgtgca ggtgtgtagg tgtatgagtg tgtaggggtg gtatatgcag gggtgtgtat 000800
000801 gtaggtgtat gaatgtaggt gtgtatgtgt aggtgtaggt gtgggtaggt gtaggtgtgt ggtgtgtgta ggtgtgtatg 000880
000881 tgtaggtgta ggggtgtgtg tgtaggtgtg gtgggtgtag atgtgtgtgt ggtgtgtgtg taggtgtatg agtgtgtagg 000960
000961 tgtggtgtgt gtaagggtgt gtgtaggtgt atgagtatag gtgtggtgtg tgtaggtgtg ggtgtagatg tgtgtgtggt 001040
001041 gtgtgtaggg gtgtgtgtag gtgtatgagt gtaggtgtgg tgtgtgtagg tgtgtgtggt gggtgtagat gtgtgtgtgg 001120
001121 tgtgtgtagg tgtatgagtg tgtaggtgtg atgtgtgtag gggtgtgtgt aggtgtatga atgtgtgtgt gtaggtgtgt 001200
001201 gtggtgggtg tagatatgtg tgtgtggtgt gtgtagggct gtgtgtgtag gtttatgagt ggaggtgtgt gtggaggtgt 001280
001281 gtggtgggtg tagatgtgtg tggtgtgtgt gtgggggtgt gtaggtgtat gggtgtgtag gtgtggtgtg tagggctgtg 001360
001361 tgtgtaggtg tatgagtgga ggtgtgtgga ggtgtgtgtg gtgggtgtag atgtgtgtgt ggtgtgtgta ggggggtgtg 001440
001441 tgtaggtgta tgagtggagg tatgacgtgt ggaggtgtgt gtggtgggtg tagatgtgtg tgtggtgtgt gtaggggtgt 001520
001521 gtgtaggtgc atgagtgtgt aggtgtggtg tgtgtgtagg ggtgtctgtg taggtgtatg agtgtaggtg tgtgtggagg 001600
001601 tgtgtgtggt gggtgtagat gtgtgtgtgg tgtgtgtgta ggtCTATGGG TGGAGGTGTG GTGTGTGGAG GTGTGTGTGG 001680
001681 TGGATGTGGC GGCTGGTGTA GAGGGATGAG GCAGGTATTG TGGTACCCAC CGG
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Predicted Small Protein

Name NONHSAT085056_smProtein_326:610
Length 95
Molecular weight 9785.3532
Aromaticity 0.063829787234
Instability index 71.1840425532
Isoelectric point 9.00079345703
Runs 10
Runs residual 0.0224329324699
Runs probability 0.024686451157
Amino acid sequence MPGRSPASTPSFPGGRAWPLLTMPCLTIQSLRLFPQPPPIWVRESHADGGGTAAPGPLEG
AASNRGAPFGSGGLLPLWEACVCRGVCRCVRVCM
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEELLLLLLEEEEEELLLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLHHHHEEELLEEEEEEEEL
PRMN -
PiMo -