NONHSAT085056
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT085056 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1733 nt |
Genomic location |
chr22-:35738650..35740638 |
Exon number |
2 |
Exons |
35738650..35738949,35739206..35740638 |
Genome context |
|
Sequence |
000001 CAGGCAGGAG CAGAGCCCAG AGAGAAGGCA GGAGCCGACT TCCCAGCAGC AGTGGCAACA GCAAGTGCCC AGCTGTGCAC 000080
000081 ACCGGCTCCG TCTCCCGCTC CGCTATCCCC ATCGCCTCTT AGCTGCCAGA CGGGCTACCT TGTCCTTGCC CGAGACTCAA 000160 000161 GAGCAGGAAC CGGGCACAGA GGAGCTGCGG AAGCTGGGCT GGCCGGGCCA ACCCGGAAAC AGCCTGAGCC CTGGGGTCCC 000240 000241 GCAAGACCCT CAGCTGCCCC TCCTTGCTCC TCTGGGCCTT CTCCTGGGTC CCACTCCCTT GGAGAGCAGC ACGGTGCCCC 000320 000321 ACGCCCATGC CTGGCAGGAG CCCTGCGAGC ACCCCCAGCT TTCCGGGTGG CCGGGCCTGG CCCCTGCTCA CCATGCCTTG 000400 000401 TCTCACCATC CAGTCACTGA GGCTTTTCCC GCAGCCGCCT CCCATCTGGG TGAGAGAGAG TCACGCTGAT GGCGGAGGGA 000480 000481 CGGCAGCGCC AGGGCCACTG GAGGGCGCGG CTTCTAACAG GGGTGCGCCT TTCGGGTCAG GAGGCCTGCT GCCACTTTGG 000560 000561 GAGGCgtgtg tgtgtagggg tgtgtgtagg tgtgtaaggg tgtgtatgta ggtgtatgag tgtaggtgtg tgtgtaggtg 000640 000641 tatgagtgta ggtttgtatg tgtaggtgta ggttgtgtag gtatagatgt atgtggtgtg tgtaggtggt gtgtgtagat 000720 000721 gtgtgtggtg tgtgtagggg tgtgtgtgca ggtgtgtagg tgtatgagtg tgtaggggtg gtatatgcag gggtgtgtat 000800 000801 gtaggtgtat gaatgtaggt gtgtatgtgt aggtgtaggt gtgggtaggt gtaggtgtgt ggtgtgtgta ggtgtgtatg 000880 000881 tgtaggtgta ggggtgtgtg tgtaggtgtg gtgggtgtag atgtgtgtgt ggtgtgtgtg taggtgtatg agtgtgtagg 000960 000961 tgtggtgtgt gtaagggtgt gtgtaggtgt atgagtatag gtgtggtgtg tgtaggtgtg ggtgtagatg tgtgtgtggt 001040 001041 gtgtgtaggg gtgtgtgtag gtgtatgagt gtaggtgtgg tgtgtgtagg tgtgtgtggt gggtgtagat gtgtgtgtgg 001120 001121 tgtgtgtagg tgtatgagtg tgtaggtgtg atgtgtgtag gggtgtgtgt aggtgtatga atgtgtgtgt gtaggtgtgt 001200 001201 gtggtgggtg tagatatgtg tgtgtggtgt gtgtagggct gtgtgtgtag gtttatgagt ggaggtgtgt gtggaggtgt 001280 001281 gtggtgggtg tagatgtgtg tggtgtgtgt gtgggggtgt gtaggtgtat gggtgtgtag gtgtggtgtg tagggctgtg 001360 001361 tgtgtaggtg tatgagtgga ggtgtgtgga ggtgtgtgtg gtgggtgtag atgtgtgtgt ggtgtgtgta ggggggtgtg 001440 001441 tgtaggtgta tgagtggagg tatgacgtgt ggaggtgtgt gtggtgggtg tagatgtgtg tgtggtgtgt gtaggggtgt 001520 001521 gtgtaggtgc atgagtgtgt aggtgtggtg tgtgtgtagg ggtgtctgtg taggtgtatg agtgtaggtg tgtgtggagg 001600 001601 tgtgtgtggt gggtgtagat gtgtgtgtgg tgtgtgtgta ggtCTATGGG TGGAGGTGTG GTGTGTGGAG GTGTGTGTGG 001680 001681 TGGATGTGGC GGCTGGTGTA GAGGGATGAG GCAGGTATTG TGGTACCCAC CGG |
Predicted Small Protein
Name | NONHSAT085056_smProtein_326:610 |
Length | 95 |
Molecular weight | 9785.3532 |
Aromaticity | 0.063829787234 |
Instability index | 71.1840425532 |
Isoelectric point | 9.00079345703 |
Runs | 10 |
Runs residual | 0.0224329324699 |
Runs probability | 0.024686451157 |
Amino acid sequence | MPGRSPASTPSFPGGRAWPLLTMPCLTIQSLRLFPQPPPIWVRESHADGGGTAAPGPLEG AASNRGAPFGSGGLLPLWEACVCRGVCRCVRVCM |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEELLLLLLEEEEEELLLLLLLLLLLLLLL LLLLLLLLLLLLLLLLHHHHEEELLEEEEEEEEL |
PRMN | - |
PiMo | - |