NONHSAT085128

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT085128

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

406 nt

Genomic location

chr22-:37163107..37171743

Exon number

3

Exons

37163107..37163409,37163827..37163903,37171718..37171743

Genome context

Sequence
000001 GCTGGCAGCC AAATGCATCC TGGCAGACCC AGCAGTGGGC AAGACCGCCC TGGCACAGAT CTTCCGCAGT GATGGAGCCC 000080
000081 ATTTCCAGAA AAGCTACACC CTGACAACAG GAATGGATTT GGTGGTGAAG ACAGTGCCAG TTCCTGACAC GGGAGACAGT 000160
000161 GTGGTGAGTG ATGCCTTTAC CCAGGGGAAC TCAGGGCTCC CCCAGCTGGG CCCAGGGTCT CTGTGGTCAC ACCATCCTCC 000240
000241 CTAGGAGAGA TGCAGTGCAA GGCTGTGGTC TAGACTTGGC TGAGCATTTC GGAATAGAAT CGGGAAGCAT TCAAGGGAGG 000320
000321 GACTGAGGAG GTGGAGGAGG AAGGAAGGAA GGAGGACTAG GAGATGGGCC TGGCCCTTGA GGAACTTGTT CTCTACTATC 000400
000401 AAGGTT
[back to top]

Predicted Small Protein

Name NONHSAT085128_smProtein_170:325
Length 52
Molecular weight 5373.9742
Aromaticity 0.0392156862745
Instability index 48.3980392157
Isoelectric point 6.00396728516
Runs 9
Runs residual 0.0222286934576
Runs probability 0.0442108775442
Amino acid sequence MPLPRGTQGSPSWAQGLCGHTILPRRDAVQGCGLDLAEHFGIESGSIQGRD
Secondary structure LLLLLLLLLLHHHHLLLLLLEELLLLLLLLLLLLLHHHHLLLLLLLEELLL
PRMN -
PiMo -