NONHSAT085128
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT085128 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
406 nt |
Genomic location |
chr22-:37163107..37171743 |
Exon number |
3 |
Exons |
37163107..37163409,37163827..37163903,37171718..37171743 |
Genome context |
|
Sequence |
000001 GCTGGCAGCC AAATGCATCC TGGCAGACCC AGCAGTGGGC AAGACCGCCC TGGCACAGAT CTTCCGCAGT GATGGAGCCC 000080
000081 ATTTCCAGAA AAGCTACACC CTGACAACAG GAATGGATTT GGTGGTGAAG ACAGTGCCAG TTCCTGACAC GGGAGACAGT 000160 000161 GTGGTGAGTG ATGCCTTTAC CCAGGGGAAC TCAGGGCTCC CCCAGCTGGG CCCAGGGTCT CTGTGGTCAC ACCATCCTCC 000240 000241 CTAGGAGAGA TGCAGTGCAA GGCTGTGGTC TAGACTTGGC TGAGCATTTC GGAATAGAAT CGGGAAGCAT TCAAGGGAGG 000320 000321 GACTGAGGAG GTGGAGGAGG AAGGAAGGAA GGAGGACTAG GAGATGGGCC TGGCCCTTGA GGAACTTGTT CTCTACTATC 000400 000401 AAGGTT |
Predicted Small Protein
Name | NONHSAT085128_smProtein_170:325 |
Length | 52 |
Molecular weight | 5373.9742 |
Aromaticity | 0.0392156862745 |
Instability index | 48.3980392157 |
Isoelectric point | 6.00396728516 |
Runs | 9 |
Runs residual | 0.0222286934576 |
Runs probability | 0.0442108775442 |
Amino acid sequence | MPLPRGTQGSPSWAQGLCGHTILPRRDAVQGCGLDLAEHFGIESGSIQGRD |
Secondary structure | LLLLLLLLLLHHHHLLLLLLEELLLLLLLLLLLLLHHHHLLLLLLLEELLL |
PRMN | - |
PiMo | - |