NONHSAT086604
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT086604 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
546 nt |
Genomic location |
chr22-:37891857..37893242 |
Exon number |
3 |
Exons |
37891857..37892010,37892456..37892630,37893026..37893242 |
Genome context |
|
Sequence |
000001 GAACTGAATC CAAGTACTGA TTGGACTCCA ATTCTCATCT CCTTTCTCCC TTCTCAGGTC TCTGGCTATT CGGGTGTCTG 000080
000081 GCCGGAGCCC CCCAGGGGGC CCAGAGCCGC AGGACAAGGG ACCAGATGGA CTGTCGTTTT ATGGGGACAG ATGGTCTGGG 000160 000161 GCTGTGGTGC GCAGGGTGCT GTCTGGGCCT GGGTCCGCCA GGATGGAACC AAGAGAGCCC CTGGGCTGCT CTACTCTCAG 000240 000241 AGGCTCACTT CTTTCCCTCC CTGCCTGGGT TTTCTCCCAG CAAAGGGTGG AAGCTGCTGG TCTGGAGGGG GCGTGCCTGG 000320 000321 AAGCCGAGGC CCAGCAGAGA ACCTTGCTCT GGAATCAGGG GTCCACACTC CCCTCCCTGA TGGACTCGAA GGCCTGCCAG 000400 000401 TCCTTCCACG AGGCCCTAGA AGCCTGGGCA AAGGGACCAG GTGCCGAGCC CTTCTACATT CGTGCCAACC TCACCTTGCC 000480 000481 TGAGAGGGCA GATCCCCATG CCCTTTGCGT GAAAGCCCAA GAGATCCTTC GACTGGTGGA CTCGGC |
Predicted Small Protein
Name | NONHSAT086604_smProtein_125:379 |
Length | 85 |
Molecular weight | 9191.5515 |
Aromaticity | 0.119047619048 |
Instability index | 50.8678571429 |
Isoelectric point | 9.06622314453 |
Runs | 11 |
Runs residual | 0.0030330603579 |
Runs probability | 0.0384850090733 |
Amino acid sequence | MDCRFMGTDGLGLWCAGCCLGLGPPGWNQESPWAALLSEAHFFPSLPGFSPSKGWKLLVW RGRAWKPRPSREPCSGIRGPHSPP |
Secondary structure | LLLEEELLLLHHHHHLLLLLLLLLLLLLLLLHHHHHHHHLLLLLLLLLLLLLLLEEEEEE ELLEELLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |