NONHSAT086643
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT086643 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
853 nt |
Genomic location |
chr22+:38302889..38318043 |
Exon number |
4 |
Exons |
38302889..38303485,38307959..38308007,38308358..38308499,38317979..38318043 |
Genome context |
|
Sequence |
000001 TGACCTCTTT GAAGGGGTGT TGAGCCCTCT TTGGGGGCCC TGGGCCTCTC CTACCCTAAA CTCTTCTCCA CGGGCTCGCC 000080
000081 GGGCCTCCCC TCTCCCCCGA GGCTTCCCAC TCGGGGTGGC CCCTTGCTCC GGGTGTGCAG GTGAACCCCC ACTTCTCTGA 000160 000161 CCCCCAAATA GGAGCTtgtc tccggacagt agcacagttc ccggcacaga ggagacctcg gctaacaggt gttggatgaa 000240 000241 tggatGTACA GACCCTGTGC TTTCCCCACG CCCCCCAACT TAGGACGCAG CCCTGCCTCC CGGGTGTGTG CTCGATGGCC 000320 000321 CTGCAGCCCT CCTCAGTGGG GCACGCAGGT GGGGCGCGCA AGAGGAGTCA CAGGCCGGCA ATGTTGGGAA GACTCCTAGG 000400 000401 ATCCGATTGA TAGACACCAA CCGGGTGCTG CAGGTTGTGA AATGGCCCCT TCCTGCCCAG AGCTGCCCAA TGAGGTTCTC 000480 000481 ATGGGAAAAT GCATTCAGAC TCCCCGGAAC AGTTGACTTG GAGCCTCTGT CTTTGCTCTC TCTGCCTTGA GCCCTGGAAC 000560 000561 CTCTCCTCCT TTCGTCCCTT CATTCCTAAA ACACTGGAGA TTTTGATTCG CTTTCCAAGG ACAATGTCTT CGAGAATAAC 000640 000641 CGTTTGGCCT TTGAAGTGGC TGAGAAGGAG CTGGGGATCC CCGCTCTCCT GGACCCCAAT GACATGGTCT CCATGAGCGT 000720 000721 CCCTGACTGC CTCAGCATCA TGACCTATGT GTCCCAGTAT TACAACCACT TCTGCAGTCC TGGCCAAGGT GTCGGCGGTG 000800 000801 CTCCAGCACC CTGCTCCCTG GGGCTTATGA GAATGGGCCT GAGGAGGGCA CCT |
Predicted Small Protein
Name | NONHSAT086643_smProtein_488:715 |
Length | 76 |
Molecular weight | 8920.4161 |
Aromaticity | 0.133333333333 |
Instability index | 84.3053333333 |
Isoelectric point | 9.60552978516 |
Runs | 10 |
Runs residual | 0.0156028368794 |
Runs probability | 0.0462904080551 |
Amino acid sequence | MHSDSPEQLTWSLCLCSLCLEPWNLSSFRPFIPKTLEILIRFPRTMSSRITVWPLKWLRR SWGSPLSWTPMTWSP |
Secondary structure | LLLLLHHHLLLEEELLLLLLLLLLLLLLLLLLHHHHHHHHHLLLLLLLLEEEEHHHHHHH HLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |